Jatropha Genome Database
- JcCA0289691.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0289691.10 - phase: 0 /pseudo/partial
(1389 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02900 1312 0.0
>KJC_c02900
Length = 1210
Score = 1312 bits (662), Expect = 0.0
Identities = 662/662 (100%)
Strand = Plus / Minus
Query: 1 ctggaggaaaaactgcttctatgaaaactctaggcatagcatctcttatgtcaaaggctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 ctggaggaaaaactgcttctatgaaaactctaggcatagcatctcttatgtcaaaggctg 848
Query: 61 gcttgtttttgcctagtaaaaacatcccaagaattccatggtttgatcttgttctagcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 gcttgtttttgcctagtaaaaacatcccaagaattccatggtttgatcttgttctagcgg 788
Query: 121 atattggagatcaccagtcgctggagcaaaatctttcaacttttagtgggcacatatcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 atattggagatcaccagtcgctggagcaaaatctttcaacttttagtgggcacatatcac 728
Query: 181 gcctttgtaagatcttggaagtggcctctaaagaatcacttgtcctcatagacgaaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 gcctttgtaagatcttggaagtggcctctaaagaatcacttgtcctcatagacgaaattt 668
Query: 241 gtagcggaacagatccttctgaaggggtggcactttcagccagcatcttaaaatatctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gtagcggaacagatccttctgaaggggtggcactttcagccagcatcttaaaatatctta 608
Query: 301 aagatcgtgttaacttagctgttgtaacaactcattatgctgatttaagtcgcctcaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aagatcgtgttaacttagctgttgtaacaactcattatgctgatttaagtcgcctcaaag 548
Query: 361 ataaggatactggatttgtgaatgcggccatggaattttctcttgaaaccttacaaccta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ataaggatactggatttgtgaatgcggccatggaattttctcttgaaaccttacaaccta 488
Query: 421 cttatcagatcctctgggggagaactggtgattctaatgcactaagcattgctgaatcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cttatcagatcctctgggggagaactggtgattctaatgcactaagcattgctgaatcta 428
Query: 481 ttggttttgatagtagtattattgaacgtgcacagatgtgggttgagaagttaatgcctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ttggttttgatagtagtattattgaacgtgcacagatgtgggttgagaagttaatgcctg 368
Query: 541 aaaagctgcaacagcggaaaggtttgctgtatcaatcactactggaggaaagaaacagat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaaagctgcaacagcggaaaggtttgctgtatcaatcactactggaggaaagaaacagat 308
Query: 601 tggaaactcaggccatgagagctgcttcacttcatgcagaaattatgcaaatctaccacg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tggaaactcaggccatgagagctgcttcacttcatgcagaaattatgcaaatctaccacg 248
Query: 661 ag 662
||
Sbjct: 247 ag 246
Score = 424 bits (214), Expect = e-118
Identities = 217/218 (99%)
Strand = Plus / Minus
Query: 661 aggcgtgtgccagcactcatggcaaaagaaacccaacaggtccaacaggaagtaaaggtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aggcgtgtgccagcactcatggcaaaagaaacccaacaggtccaacaggaagtaaaggtt 159
Query: 721 acgaagtctcagatagaaattgtggtgcataactttgaaaatcagcttagaaaagcgagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 acgaagtctcagatagaaattgtggtgcataactttgaaaatcagcttagaaaagcgagc 99
Query: 781 ccagatcagtttaattcactgattagaaagtcagaatctgcaattgcatccattgttgaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 ccagatcagtttaattcactgattagaaagtcagaatctgcaattgcatccattgttgaa 39
Query: 841 gctcattgtcctgctgaaagtcttcctgccaatgaagc 878
||||||||||||||||||||||||||||||||| ||||
Sbjct: 38 gctcattgtcctgctgaaagtcttcctgccaataaagc 1