Jatropha Genome Database
- JcCA0289051.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0289051.10 - phase: 0
(780 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03734 787 0.0
KJC_c00969 496 e-140
>KJC_c03734
Length = 615
Score = 787 bits (397), Expect = 0.0
Identities = 411/413 (99%), Gaps = 2/413 (0%)
Strand = Plus / Minus
Query: 1 atggtggagattatgcacatgcgtcataaatttgatgttgacacaaggctggttgaaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 atggtggagattatgcacatgcgtcataaatttgatgttgacacaaggctggttgaaggt 352
Query: 61 ctagtccttgatcatggttctagacatcctgacatgaagcgacgagcagagaactgttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ctagtccttgatcatggttctagacatcctgacatgaagcgacgagcagagaactgttac 292
Query: 121 atcttgacttgcaatgtgtctctggagtatgagaaaagtgaaataaatgcaggatttttc 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 291 atcttgacttgcaatgtgtctctggagtatgagaaaagtgaa-taaatgcaggatttttc 233
Query: 181 tattcaaacgcagagcaaagggaggcaatggttgctgctgaaaggcgccaggtggatgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tattcaaacgcagagcaaagggaggcaatggttgctgctgaaaggcgccaggtggatgag 173
Query: 241 agagtgaaaagaatcattgaacttaaaaacaaggtttgttccggtaatgacaacaatttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 agagtgaaaagaatcattgaacttaaaaacaaggtttgttccggtaatgacaacaatttt 113
Query: 301 gttgtcattaatcagaagggtattgatcccccttcattggatctccttgctcgtgcaggg 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 112 gttgtcattaatcagaagggtattgat-ccccttcattggatctccttgctcgtgcaggg 54
Query: 361 ataattgcccttcgaagagccaagagaagaaatatggaacgcctggttttggc 413
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 ataattgcccttcgaagagccaagagaagaaatatggaacgcctggttttggc 1
>KJC_c00969
Length = 603
Score = 496 bits (250), Expect = e-140
Identities = 260/262 (99%), Gaps = 1/262 (0%)
Strand = Plus / Minus
Query: 401 gcctggttttggcttgtggaggcgaagctgtgaattctgtggatgatttaacccctgatt 460
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 603 gcctggttttggcttgtggaggcgaagctgtgaattctgtggatgatttaacccctgagt 544
Query: 461 gccttggttgggctggattggtttatgagcacattcttggtgaagagaaatatacatttg 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gccttggttgggctggattggtttatgagcacattcttggtgaagagaaatatacatttg 484
Query: 521 ttgaaaa-tgtaaaaaatcctcactcctgtacaatcttaataaaaggccctaatgaccac 579
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ttgaaaaatgtaaaaaatcctcactcctgtacaatcttaataaaaggccctaatgaccac 424
Query: 580 acaattgcccaaataaaggatgctctgcgtgatggcctaagagctgtcaaaaataccatc 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 acaattgcccaaataaaggatgctctgcgtgatggcctaagagctgtcaaaaataccatc 364
Query: 640 gaagatcaagctgttgtacttg 661
||||||||||||||||||||||
Sbjct: 363 gaagatcaagctgttgtacttg 342