Jatropha Genome Database

JcCA0289001.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0289001.10 + phase: 0 /partial
         (570 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c07631                                                            854   0.0  

>KJC_c07631 
          Length = 612

 Score =  854 bits (431), Expect = 0.0
 Identities = 431/431 (100%)
 Strand = Plus / Plus

                                                                       
Query: 140 gtgctgatgaacagtgtgctggttatggaaggcacagaactaaatacagatgtggaagtt 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtgctgatgaacagtgtgctggttatggaaggcacagaactaaatacagatgtggaagtt 60

                                                                       
Query: 200 ggcttgggcttcatgaagaaatgaagttggacatgcaaagaatatggaaacgaaacatgg 259
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggcttgggcttcatgaagaaatgaagttggacatgcaaagaatatggaaacgaaacatgg 120

                                                                       
Query: 260 ggagagatgatagatgcatcgctgataatgggaaggaggctagatttcctttcttggatg 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggagagatgatagatgcatcgctgataatgggaaggaggctagatttcctttcttggatg 180

                                                                       
Query: 320 aagatgttattagaactctccttgatattcccttgtggaaggttgccaacctcaatcaac 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagatgttattagaactctccttgatattcccttgtggaaggttgccaacctcaatcaac 240

                                                                       
Query: 380 ctagtggaacaggtgataagaagatcctaagagaggttgcatggatgcttgggttacacg 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctagtggaacaggtgataagaagatcctaagagaggttgcatggatgcttgggttacacg 300

                                                                       
Query: 440 aggcagcaattcttcctaaaagagcaatacagtttggctccagaattgcaagggaatcca 499
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggcagcaattcttcctaaaagagcaatacagtttggctccagaattgcaagggaatcca 360

                                                                       
Query: 500 atagaaaaaattttggaagtaatcgcgcagcaaaccaggcatctgccggaagtgtagtaa 559
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atagaaaaaattttggaagtaatcgcgcagcaaaccaggcatctgccggaagtgtagtaa 420

                      
Query: 560 taaatatggtg 570
           |||||||||||
Sbjct: 421 taaatatggtg 431