Jatropha Genome Database
- JcCA0288711.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0288711.10 - phase: 1 /partial
(1256 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c07749 1235 0.0
KJC_c06431 56 2e-07
KJC_c01496 52 3e-06
>KJC_c07749
Length = 680
Score = 1235 bits (623), Expect = 0.0
Identities = 670/678 (98%), Gaps = 7/678 (1%)
Strand = Plus / Minus
Query: 361 attttgaagacgacaatttattgggtaagggtggatttggacgtgtttataaagctatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 attttgaagacgacaatttattgggtaagggtggatttggacgtgtttataaagctatat 621
Query: 421 tggaagagaacaagcatgttgccgtcaagaaactagactgtgcaggtgaagatgcacaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tggaagagaacaagcatgttgccgtcaagaaactagactgtgcaggtgaagatgcacaaa 561
Query: 481 gagaatttgagaatgaagtggacttgttaagcaaaattcatcacccaaatatcatttctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gagaatttgagaatgaagtggacttgttaagcaaaattcatcacccaaatatcatttctc 501
Query: 541 ttatgggatatagtgttcatgaggagatgggcttcattgtttatgaactgatgcaaaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttatgggatatagtgttcatgaggagatgggcttcattgtttatgaactgatgcaaaatg 441
Query: 601 gatcccttgaagatctattgcatggaccttctcgaggatcttcattaagttggcatatgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gatcccttgaagatctattgcatggaccttctcgaggatcttcattaagttggcatatgc 381
Query: 661 gattgaaag-ttgctctagatatagcaagaggattagaatatctacatgagttctgcaag 719
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gattgaaagtttgctctagatatagcaagaggattagaatatctacatgagttctgcaag 321
Query: 720 ccagcagtgatccatagagatctgaaatcatctaatatacttttggattctaaattcaat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccagcagtgatccatagagatctgaaatcatctaatatacttttggattctaaattcaat 261
Query: 780 gccaagctatcagattttggtcttgctgtagcagatagctcacaaaacaagaacaagctc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gccaagctatcagattttggtcttgctgtagcagatagctcacaaaacaagaacaagctc 201
Query: 840 aagctttcaggcactgtaggttatgtagctccagagtatatgttggat-ggtgagctaac 898
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 200 aagctttcaggcactgtaggttatgtagctccagagtatatgttggatgggtgagctaac 141
Query: 899 agagaagagtgatgtctatgc--ttttggggttgtgc-ttttggagcttctact-gggaa 954
||||||||||||||||||||| ||| |||||||||| |||||||||||||||| |||||
Sbjct: 140 agagaagagtgatgtctatgcgttttgggggttgtgctttttggagcttctactggggaa 81
Query: 955 gaagacctgtagaaaaactggcaccagctcattgccaatctattgtaacatgggccat-g 1013
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 80 gaagacctgtagaaaaactggcaccagctcattgccaatctattgtaacatgggccatcg 21
Query: 1014 cctcagctcactaataga 1031
||||||||||||||||||
Sbjct: 20 cctcagctcactaataga 3
>KJC_c06431
Length = 432
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 908 tgatgtctatgcttttggggttgtgcttttggagct 943
|||||| ||| |||||||||||||||||||||||||
Sbjct: 246 tgatgtttattcttttggggttgtgcttttggagct 211
>KJC_c01496
Length = 1459
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 892 agctaacagagaagagtgatgtctatgcttttggggttgtgcttttggagcttctactgg 951
||||||||||||||||||| || ||| |||||| ||||| | |||||||||||| |
Sbjct: 468 agctaacagagaagagtgacgtttatagttttggagttgttatgttggagcttctaactg 409
Query: 952 gaagaagacc 961
||||||||||
Sbjct: 408 gaagaagacc 399