Jatropha Genome Database
- JcCA0286951.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0286951.10 + phase: 0
(591 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04538 664 0.0
KJC_s14915 599 e-171
KJC_c06937 64 4e-10
>KJC_c04538
Length = 810
Score = 664 bits (335), Expect = 0.0
Identities = 365/375 (97%), Gaps = 10/375 (2%)
Strand = Plus / Plus
Query: 1 atgaaggctcctccaaatggttttatgtcaaattctgcagaaggagaaaggaagagtatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 atgaaggctcctccaaatggttttatgtcaaattctgcagaaggagaaaggaagagtatt 495
Query: 61 aattcagagctatggcatgcatgtgcggggccgctggtctctctgcctccagttggaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aattcagagctatggcatgcatgtgcggggccgctggtctctctgcctccagttggaagt 555
Query: 121 cttgtagtttacttcccccaaggccacagtgagcaagtcgcagcatctatgcaaaaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cttgtagtttacttcccccaaggccacagtgagcaagtcgcagcatctatgcaaaaggag 615
Query: 181 actgattttataccaagctatcccaaccttccttccaagttgatttgtatgcttcataat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 actgattttataccaagctatcccaaccttccttccaagttgatttgtatgcttcataat 675
Query: 241 gtcacattgcatgctgatgcagaaactgatgaggtctatgctcagatgacccttcaacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gtcacattgcatgctgatgcagaaactgatgaggtctatgctcagatgacccttcaacct 735
Query: 301 ---------tatgacaaggaagcattactggcatctgatat-gggcctcaagcaaagcag 350
|||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 736 gtaagcaaatatgacaaggaagcattactggcatctgatatggggcctcaagcaaagcag 795
Query: 351 gcaacctgccgaatt 365
|||||||||||||||
Sbjct: 796 gcaacctgccgaatt 810
>KJC_s14915
Length = 467
Score = 599 bits (302), Expect = e-171
Identities = 302/302 (100%)
Strand = Plus / Minus
Query: 241 gtcacattgcatgctgatgcagaaactgatgaggtctatgctcagatgacccttcaacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gtcacattgcatgctgatgcagaaactgatgaggtctatgctcagatgacccttcaacct 408
Query: 301 tatgacaaggaagcattactggcatctgatatgggcctcaagcaaagcaggcaacctgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tatgacaaggaagcattactggcatctgatatgggcctcaagcaaagcaggcaacctgcc 348
Query: 361 gaattcttttgcaaaactctcacagctagtgacacaagtacacatggtggattctccgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gaattcttttgcaaaactctcacagctagtgacacaagtacacatggtggattctccgta 288
Query: 421 cctcgccgagcagctgagaagattttcccaccactagatttttcaatgcaaccacctgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 cctcgccgagcagctgagaagattttcccaccactagatttttcaatgcaaccacctgcc 228
Query: 481 caggagctggtagccagggatttacatgataatacatggacatttagacatatttatcgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 caggagctggtagccagggatttacatgataatacatggacatttagacatatttatcgc 168
Query: 541 gg 542
||
Sbjct: 167 gg 166
>KJC_c06937
Length = 472
Score = 63.9 bits (32), Expect = 4e-10
Identities = 89/108 (82%)
Strand = Plus / Plus
Query: 193 ccaagctatcccaaccttccttccaagttgatttgtatgcttcataatgtcacattgcat 252
|||| |||||| || |||||||| ||| | | ||| ||||||| ||||| |||||||||
Sbjct: 303 ccaaactatccaaatcttccttcaaagctattgtgtctgcttcacaatgtgacattgcat 362
Query: 253 gctgatgcagaaactgatgaggtctatgctcagatgacccttcaacct 300
|| || ||||||| ||||| || |||||||||||||| || ||||||
Sbjct: 363 gcggacccagaaacagatgaagtttatgctcagatgactctccaacct 410