Jatropha Genome Database

JcCA0285981.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0285981.10 - phase: 0 
         (1590 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02385                                                             82   5e-15

>KJC_c02385 
          Length = 1191

 Score = 81.8 bits (41), Expect = 5e-15
 Identities = 95/113 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1000 cttcttgagaaggttaagcatgctaagcagcttaaaatcgggacttggtgtattgaggtt 1059
            ||||||||||||||| | |||| |||| |||| ||||| |||| |||||||||| |||||
Sbjct: 1037 cttcttgagaaggttcatcatgttaaggagctaaaaattgggaattggtgtattcaggtt 1096

                                                                 
Query: 1060 atgtcaatcctagaggttaaagctatgccttctccagaatcaactcgcaaatg 1112
             |||||||  ||||||| |||| | |||||||||||   |||| |||||||||
Sbjct: 1097 ttgtcaatattagaggtcaaaggtctgccttctccattgtcaaatcgcaaatg 1149