Jatropha Genome Database

JcCA0285321.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0285321.20 - phase: 1 /partial/short
         (74 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01639                                                             80   7e-16

>KJC_c01639 
          Length = 1158

 Score = 79.8 bits (40), Expect = 7e-16
 Identities = 47/48 (97%), Gaps = 1/48 (2%)
 Strand = Plus / Minus

                                                          
Query: 1  gtattgatactgctaatgatttaattgagtgtataaagaagaaatctt 48
          |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 47 gtattgatactgctaatgatttaa-tgagtgtataaagaagaaatctt 1