Jatropha Genome Database
- JcCA0285321.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0285321.10 - phase: 2 /pseudo/partial
(1429 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01639 611 e-174
KJC_s19430 535 e-152
KJC_c08663 190 6e-48
>KJC_c01639
Length = 1158
Score = 611 bits (308), Expect = e-174
Identities = 480/536 (89%), Gaps = 1/536 (0%)
Strand = Plus / Minus
Query: 871 tctatggaaaaggattgcgatttcagattttagcatgaccatatacaccaagatttttct 930
|||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 535 tctatggaaaagaattgcaatttcagattttagcatgaccgtatacaccaagatttttct 476
Query: 931 caagttcccttacaaattctgggctactggtcctggaactgagttctttctttatacccg 990
|||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 475 caagttcccttacaaattctggcctactggtcctggaactgagttctttctatataccca 416
Query: 991 tgtcaggcgcggttattatccattttggcagcatttagagaatgagtatccaggatcaaa 1050
||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 415 tgtcaggcggggttactatcctttttggcagcatttggagaatgagtatccaggatcaaa 356
Query: 1051 cattttaatcgtaacggtcacgggtgatgagtcaagaaggattgagcaattatcagaaga 1110
| ||||| ||||||| || || | |||||||||||||||||| |||||||||||||| ||
Sbjct: 355 cgttttattcgtaactgtaacagctgatgagtcaagaaggatagagcaattatcagatga 296
Query: 1111 agcagttgaagcagagatgatggaagtacttaaaaagttatttggtaataatattcctaa 1170
|| | |||||||||||| |||||| |||||||||| ||||||||| |||||||||| ||
Sbjct: 295 agaaattgaagcagagacaatggaaatacttaaaaaattatttggtgataatattccaaa 236
Query: 1171 accagaagcaatacttgtgcctagatggggcttggatgaattacagaaaggcagttatgc 1230
|||||||||||| |||||||| ||||||||||||||| |||| | |||| ||||| |
Sbjct: 235 accagaagcaatgcttgtgcccagatggggcttggataaattctaccaaggaagttactc 176
Query: 1231 taatggacctggtagtcacaatgaaaaacgcaaagaacacttagctgatcctgtcggtcc 1290
|||| | |||| |||| ||||| |||| |||||||| || ||||||||||||||||||||
Sbjct: 175 taattggcctgatagttacaatcaaaagcgcaaagaccatttagctgatcctgtcggtcc 116
Query: 1291 agtatactttacaggagagcataccagcaataaatatataggatttgcaactggttcttg 1350
||| |||||||||||||||||||||||| |||| |||||||||| |||||||||| |||
Sbjct: 115 agtttactttacaggagagcataccagcgataagtatataggatatgcaactggtgctta 56
Query: 1351 ttttgcaggtattgatactgcaaatgatttaattaagtgtataaaggaggaatctt 1406
||| ||||||||||||||||| |||||||||| | ||||||||||| || ||||||
Sbjct: 55 tttggcaggtattgatactgctaatgatttaa-tgagtgtataaagaagaaatctt 1
Score = 373 bits (188), Expect = e-103
Identities = 370/428 (86%), Gaps = 2/428 (0%)
Strand = Plus / Minus
Query: 445 tgatttctgcacagcagtttcaaaaaatctatctgggaaagaaaaggatgttgatgtctc 504
|||||||||| |||| |||| ||||| ||||||| | |||||||| | ||||||||
Sbjct: 1003 tgatttctgcgcagcgttttcgaaaaaactatctgtccagaaaaaggatatcgatgtctc 944
Query: 505 aattttggctgcacaacgcttatacaa-acggtacccacaactccacttgaaatggtaat 563
||||||||||||||| || ||| ||| | || |||||||| ||||||||||||||||||
Sbjct: 943 aattttggctgcacagcgtatattcaagaaggcacccacaagtccacttgaaatggtaat 884
Query: 564 agattactatcaccacgactacatagatgcagagccaccaaaagtaacaagcttgaagca 623
||||||||||||| | |||| ||| ||||||||||||||||||||||| ||||||||
Sbjct: 883 agattactatcacaatgactttgaagacgcagagccaccaaaagtaacaagtttgaagca 824
Query: 624 caaatatcccagaaacgagttttgtagaccatggacccgttccatgctttctggttgatc 683
|| ||| || ||||||||||| |||||||||||| | | || |||| ||| |||||
Sbjct: 823 cacataccctagaaacgagttg-gtagaccatggagaggatgaatactttgtggctgatc 765
Query: 684 ctagaggctttgaggccatagttgaagatcttgctaagcagtttctttcctctttgactg 743
|||||||||||||| |||||| || |||||||||| |||||||| || |||||||||
Sbjct: 764 ctagaggctttgagattatagttcaatatcttgctaaacagtttctgtcttctttgacta 705
Query: 744 aggatcccaagcttaagcttaataaggtagttagacaaataaattactcagatgatagag 803
| ||||||| ||| |||||||| |||||||||||||||||||||||||| |||||| |||
Sbjct: 704 aagatcccaggctcaagcttaacaaggtagttagacaaataaattactcggatgatggag 645
Query: 804 ttactgtaaaaactggggatggttctacgtacaattccaagtatgttattgtctctgcta 863
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ttactgtaaaaactggagatggttctacgtacaattccaagtatgttattgtctctgcta 585
Query: 864 gtcttggt 871
||||||||
Sbjct: 584 gtcttggt 577
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 263 aatcccttattggacatagccaaaaaactcaaactcaaaacttatactaatgacta 318
|||||||| || ||| | |||||||||||||||||||||| |||| |||||||||
Sbjct: 1152 aatcccttgttagacttggccaaaaaactcaaactcaaaatttatcttaatgacta 1097
>KJC_s19430
Length = 478
Score = 535 bits (270), Expect = e-152
Identities = 270/270 (100%)
Strand = Plus / Plus
Query: 602 caaaagtaacaagcttgaagcacaaatatcccagaaacgagttttgtagaccatggaccc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaaagtaacaagcttgaagcacaaatatcccagaaacgagttttgtagaccatggaccc 60
Query: 662 gttccatgctttctggttgatcctagaggctttgaggccatagttgaagatcttgctaag 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttccatgctttctggttgatcctagaggctttgaggccatagttgaagatcttgctaag 120
Query: 722 cagtttctttcctctttgactgaggatcccaagcttaagcttaataaggtagttagacaa 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagtttctttcctctttgactgaggatcccaagcttaagcttaataaggtagttagacaa 180
Query: 782 ataaattactcagatgatagagttactgtaaaaactggggatggttctacgtacaattcc 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ataaattactcagatgatagagttactgtaaaaactggggatggttctacgtacaattcc 240
Query: 842 aagtatgttattgtctctgctagtcttggt 871
||||||||||||||||||||||||||||||
Sbjct: 241 aagtatgttattgtctctgctagtcttggt 270
Score = 315 bits (159), Expect = 2e-85
Identities = 166/167 (99%), Gaps = 1/167 (0%)
Strand = Plus / Plus
Query: 871 tctatggaaaaggattgcgatttcagattttagcatgaccatatacaccaagatttttct 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tctatggaaaaggattgcgatttcagattttagcatgaccatatacaccaagatttttct 371
Query: 931 caagttcccttacaaattctgggctactggtcctggaactgagttctttctttatacccg 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 caagttcccttacaaattctgggctactggtcctggaactgagttctttctttatacccg 431
Query: 991 tgtcaggcgcggttattatccattttggcagc-atttagagaatgag 1036
|||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 432 tgtcaggcgcggttattatccattttggcagctatttagagaatgag 478
>KJC_c08663
Length = 408
Score = 190 bits (96), Expect = 6e-48
Identities = 271/324 (83%), Gaps = 4/324 (1%)
Strand = Plus / Plus
Query: 445 tgatttctgcacagcagtttcaaaaaatctatctgggaaagaaaaggatgttgatgtctc 504
|||||||||| ||| |||| ||||| ||||||| || |||||||| |||| |||||
Sbjct: 87 tgatttctgcgaagctttttcgaaaaaactatctgccaagaaaaaggatattgacgtctc 146
Query: 505 aattttggctgcacaacgcttataca-aacggtacccacaactccacttgaaatggtaat 563
||||||||||| |||||| | | || || |||||||| ||||||||||||||||||| |
Sbjct: 147 tattttggctgctcaacgcatgtccagaaaggtacccagaactccacttgaaatggtagt 206
Query: 564 agattactatcaccacgactacatagatgcagagccaccaaaagtaacaagcttgaagca 623
|||||||||||| | ||||| ||||| |||||| |||||||||||||| ||||||||
Sbjct: 207 agattactatcataatgactatgaagatggagagccgccaaaagtaacaagtttgaagca 266
Query: 624 caaatatcccagaaacgagttttgtagaccatggacccgttccatgctttctggttgatc 683
|| |||||||||||||||| ||||||||||||||| | ||||| ||| ||| |||||
Sbjct: 267 cacatatcccagaaacgag-tttgtagaccatggagaggatccatacttcgtggctgatc 325
Query: 684 ctagaggctttgaggccatag-ttgaagatcttgctaagcagtttctttcctctttgact 742
||||||| |||||| |||| || || |||||||||| ||||||||||| |||||||||
Sbjct: 326 ctagagg-tttgagattatagttttaatatcttgctaaacagtttctttcgtctttgact 384
Query: 743 gaggatcccaagcttaagcttaat 766
||||||| |||||||||||||
Sbjct: 385 acagatcccaggcttaagcttaat 408