Jatropha Genome Database

JcCA0284691.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0284691.10 + phase: 0 /partial
         (1524 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c08879                                                            797   0.0  

>KJC_c08879 
          Length = 432

 Score =  797 bits (402), Expect = 0.0
 Identities = 430/434 (99%), Gaps = 4/434 (0%)
 Strand = Plus / Minus

                                                                        
Query: 990  agtgttggtcggtacaggtgataatatatggtctggactttatgtcattgcatccacagt 1049
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 432  agtgttggtcggtacaggtgataatatatggtctggactt-atgtcattgcatccacagt 374

                                                                        
Query: 1050 -gggctttgttattttactgggttttttagatttgttctatataaacccatatggcattc 1108
             |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 373  tgggctttgttattttactgggttttttagatttgttctatataa-cccatatggcattc 315

                                                                        
Query: 1109 aattatggtggtac-aaaggacttctttttatggcatgtatggctgcaagtattttaatc 1167
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314  aattatggtggtactaaaggacttctttttatggcatgtatggctgcaagtattttaatc 255

                                                                        
Query: 1168 tttggaggctgtatagttgttttgtggcatctatgggaaaggaaaacttcagccagggac 1227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254  tttggaggctgtatagttgttttgtggcatctatgggaaaggaaaacttcagccagggac 195

                                                                        
Query: 1228 aaatccgaagaaaatgggataaaggccgacaagatgccacgcaacggagatgcggaagac 1287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194  aaatccgaagaaaatgggataaaggccgacaagatgccacgcaacggagatgcggaagac 135

                                                                        
Query: 1288 aaaaatttgtacgaggaaaaccttgcacgttctaccatggttcactatggttcgaggcca 1347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134  aaaaatttgtacgaggaaaaccttgcacgttctaccatggttcactatggttcgaggcca 75

                                                                        
Query: 1348 gatttcaaagatatttttggatatgtatcaaagcgatggggccttgttgatgtgggtgtc 1407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74   gatttcaaagatatttttggatatgtatcaaagcgatggggccttgttgatgtgggtgtc 15

                          
Query: 1408 cttgtatgtggtcc 1421
            ||||||||||||||
Sbjct: 14   cttgtatgtggtcc 1