Jatropha Genome Database

JcCA0284011.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0284011.10 + phase: 0 /partial
         (1798 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09399                                                            262   3e-69

>KJC_c09399 
          Length = 705

 Score =  262 bits (132), Expect = 3e-69
 Identities = 376/456 (82%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1332 gaaacatttcagaggaaatggtgtgattgcaagtatggagcattgtaatgacttcatgtt 1391
            |||||||||||  ||||||||||| || || ||  |||| || || || || ||||||||
Sbjct: 150  gaaacatttcaatggaaatggtgtaatagctagcttggaacactgcaacgatttcatgtt 209

                                                                        
Query: 1392 cctcggaacagaggccatagcacttgggcgagttggggatgatttttggtgcactgaccc 1451
             || ||||| ||  ||||  | ||||| || ||||| |||||||||||||||||||| ||
Sbjct: 210  tcttggaactgaaaccatctctcttggtcgcgttggtgatgatttttggtgcactgatcc 269

                                                                        
Query: 1452 atctggagatccaaatgggacatattggctacaagggtgtcacatggtacattgtgccta 1511
            |||||| |||||||  || |||| |||||| ||||| ||||||||||| || ||||| ||
Sbjct: 270  atctggtgatccaac-ggtacattttggcttcaaggttgtcacatggtccactgtgctta 328

                                                                        
Query: 1512 taatagcttgtggatgggcaatttcatacacccagattgggacatgttccaatcaaccca 1571
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 329  caatagcttgtggatgggcaatttcatacacccagattgggacatgttccaatctacaca 388

                                                                        
Query: 1572 cccttgtgctgaatttcatgctgcttcgagggccatttctggaggaccaatgtatgtgag 1631
             |||||||||||||| ||||||||||| ||||| |||||||| |||||||| || || ||
Sbjct: 389  tccttgtgctgaattccatgctgcttctagggcaatttctggcggaccaatttacgttag 448

                                                                        
Query: 1632 cgattctgttggcaaccacaacctcaaattgctcagtaggctagtgttgcctgatggctc 1691
            ||| ||||| || || |||||  ||   |||||||   | ||||| ||||| || || ||
Sbjct: 449  cgactctgtcggaaagcacaatttcccgttgctcaagcgtctagtcttgccggacggttc 508

                                                                        
Query: 1692 tattttgcgctgccagtattatgcacttcctaccagagattgcctttttcaagatccatt 1751
             ||| | || || || || ||||| |||||||| ||||||||||| ||| | |||||  |
Sbjct: 509  aattctccgatgtcaatactatgctcttcctacaagagattgcctctttgaggatcctct 568

                                                
Query: 1752 gcatgatggtaaaaccatgctcaagatttggaacct 1787
             |||||||| ||||||||||| || |||||||||||
Sbjct: 569  ccatgatggcaaaaccatgcttaaaatttggaacct 604