Jatropha Genome Database
- JcCA0282791.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0282791.10 - phase: 0 /partial
(174 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00205 345 2e-95
KJC_s17210 341 3e-94
KJC_c00788 62 4e-10
KJC_c00705 56 3e-08
>KJC_c00205
Length = 1155
Score = 345 bits (174), Expect = 2e-95
Identities = 174/174 (100%)
Strand = Plus / Minus
Query: 1 atggccattccgacattttctgcagctacccttctactctttgtgctaaatttatgcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 atggccattccgacattttctgcagctacccttctactctttgtgctaaatttatgcttt 1080
Query: 61 agaggcacttatggtgactatggaggctggcaaagtggccatgccaccttctatggcggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 agaggcacttatggtgactatggaggctggcaaagtggccatgccaccttctatggcggg 1020
Query: 121 ggtgatgcttctggcacaatgggtggtgcttgtggatatggcaatttgtacagc 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 ggtgatgcttctggcacaatgggtggtgcttgtggatatggcaatttgtacagc 966
>KJC_s17210
Length = 441
Score = 341 bits (172), Expect = 3e-94
Identities = 172/172 (100%)
Strand = Plus / Plus
Query: 3 ggccattccgacattttctgcagctacccttctactctttgtgctaaatttatgctttag 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggccattccgacattttctgcagctacccttctactctttgtgctaaatttatgctttag 60
Query: 63 aggcacttatggtgactatggaggctggcaaagtggccatgccaccttctatggcggggg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggcacttatggtgactatggaggctggcaaagtggccatgccaccttctatggcggggg 120
Query: 123 tgatgcttctggcacaatgggtggtgcttgtggatatggcaatttgtacagc 174
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgatgcttctggcacaatgggtggtgcttgtggatatggcaatttgtacagc 172
>KJC_c00788
Length = 907
Score = 61.9 bits (31), Expect = 4e-10
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 100 catgccaccttctatggcgggggtgatgcttctggcacaatgggtggtgcttgtggatat 159
||||| |||||||||||||| ||||||||| ||||| ||||| || ||||||||||||
Sbjct: 125 catgctaccttctatggcggttctgatgcttcaggcactatgggcggagcttgtggatat 184
Query: 160 ggcaatttgta 170
|| || |||||
Sbjct: 185 ggtaacttgta 195
>KJC_c00705
Length = 1113
Score = 56.0 bits (28), Expect = 3e-08
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 100 catgccaccttctatggcgggggtgatgcttctggcacaatgggtggtgcttgtggatat 159
||||| ||||| ||||| || ||||||||||| |||||||| ||||| |||||||| |||
Sbjct: 46 catgcaaccttttatggaggtggtgatgcttcaggcacaat-ggtggggcttgtggttat 104
Query: 160 ggcaattt 167
|| |||||
Sbjct: 105 gggaattt 112