Jatropha Genome Database

JcCA0282311.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0282311.10 + phase: 0 /pseudo
         (216 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00344                                                            272   3e-73

>KJC_c00344 
          Length = 1503

 Score =  272 bits (137), Expect = 3e-73
 Identities = 137/137 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    atggagataaccaatgttatggaatatgaggaaattgctaggcagaaattgccaaagatg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1378 atggagataaccaatgttatggaatatgaggaaattgctaggcagaaattgccaaagatg 1319

                                                                        
Query: 61   gtttttgactactatgcatcaggagcagaagatcagtggactctcaaggagaatcgcaat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1318 gtttttgactactatgcatcaggagcagaagatcagtggactctcaaggagaatcgcaat 1259

                             
Query: 121  gctttctctcgaattct 137
            |||||||||||||||||
Sbjct: 1258 gctttctctcgaattct 1242