Jatropha Genome Database
- JcCA0280821.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0280821.10 + phase: 0 /partial
(603 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00129 1072 0.0
KJC_c00392 888 0.0
>KJC_c00129
Length = 2849
Score = 1072 bits (541), Expect = 0.0
Identities = 552/555 (99%), Gaps = 3/555 (0%)
Strand = Plus / Minus
Query: 1 cctggcaggccaacacgcgactgtctttttgttgatccagcaagagatgggacaagtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 cctggcaggccaacacgcgactgtctttttgttgatccagcaagagatgggacaagtttg 996
Query: 61 ctgaagatttggaacgtgaacaaatgcactggtgtggttggtgtgttcaactgccaaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 ctgaagatttggaacgtgaacaaatgcactggtgtggttggtgtgttcaactgccaaggt 936
Query: 121 gcgggatggtgcaaggttgaaaagaagacccgtattcacgatgcttctcctggtaccctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 gcgggatggtgcaaggttgaaaagaagacccgtattcacgatgcttctcctggtaccctc 876
Query: 181 acagcctctgttcgtgctactgatgttgactgcattgctcaaattgctggtactgattgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 acagcctctgttcgtgctactgatgttgactgcattgctcaaattgctggtactgattgg 816
Query: 241 aacggagaaacagtagtatatgcctatagatcaggtgagttaattcgattaccaaagggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 aacggagaaacagtagtatatgcctatagatcaggtgagttaattcgattaccaaagggt 756
Query: 301 gcttcagtgccagtgacgctgaaagttcttgagtatgaactcttccatttctgcccaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gcttcagtgccagtgacgctgaaagttcttgagtatgaactcttccatttctgcccaatc 696
Query: 361 aagcagatcgcttgcaacatttcatttgcaccaatagggttgcttgacatgttcaacgcc 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 a---agatcgcttgcaacatttcatttgcaccaatagggttgcttgacatgttcaacgcc 639
Query: 421 agtggtgctgttgacaagtttgaaatccacagtgcttctgacaagaagccagagctcttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 agtggtgctgttgacaagtttgaaatccacagtgcttctgacaagaagccagagctcttc 579
Query: 481 gatggtgaggtttcatccgagctgactacttcacttggtgagaatcgatccccaactgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gatggtgaggtttcatccgagctgactacttcacttggtgagaatcgatccccaactgca 519
Query: 541 acaatcactctgaaa 555
|||||||||||||||
Sbjct: 518 acaatcactctgaaa 504
Score = 95.6 bits (48), Expect = 1e-19
Identities = 48/48 (100%)
Strand = Plus / Minus
Query: 556 cctgttccagaggaagaaatgtatagatggcctgtcgagatccagata 603
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cctgttccagaggaagaaatgtatagatggcctgtcgagatccagata 336
>KJC_c00392
Length = 675
Score = 888 bits (448), Expect = 0.0
Identities = 448/448 (100%)
Strand = Plus / Minus
Query: 108 caactgccaaggtgcgggatggtgcaaggttgaaaagaagacccgtattcacgatgcttc 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 caactgccaaggtgcgggatggtgcaaggttgaaaagaagacccgtattcacgatgcttc 616
Query: 168 tcctggtaccctcacagcctctgttcgtgctactgatgttgactgcattgctcaaattgc 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tcctggtaccctcacagcctctgttcgtgctactgatgttgactgcattgctcaaattgc 556
Query: 228 tggtactgattggaacggagaaacagtagtatatgcctatagatcaggtgagttaattcg 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tggtactgattggaacggagaaacagtagtatatgcctatagatcaggtgagttaattcg 496
Query: 288 attaccaaagggtgcttcagtgccagtgacgctgaaagttcttgagtatgaactcttcca 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 attaccaaagggtgcttcagtgccagtgacgctgaaagttcttgagtatgaactcttcca 436
Query: 348 tttctgcccaatcaagcagatcgcttgcaacatttcatttgcaccaatagggttgcttga 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tttctgcccaatcaagcagatcgcttgcaacatttcatttgcaccaatagggttgcttga 376
Query: 408 catgttcaacgccagtggtgctgttgacaagtttgaaatccacagtgcttctgacaagaa 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 catgttcaacgccagtggtgctgttgacaagtttgaaatccacagtgcttctgacaagaa 316
Query: 468 gccagagctcttcgatggtgaggtttcatccgagctgactacttcacttggtgagaatcg 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gccagagctcttcgatggtgaggtttcatccgagctgactacttcacttggtgagaatcg 256
Query: 528 atccccaactgcaacaatcactctgaaa 555
||||||||||||||||||||||||||||
Sbjct: 255 atccccaactgcaacaatcactctgaaa 228
Score = 95.6 bits (48), Expect = 1e-19
Identities = 48/48 (100%)
Strand = Plus / Minus
Query: 556 cctgttccagaggaagaaatgtatagatggcctgtcgagatccagata 603
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 cctgttccagaggaagaaatgtatagatggcctgtcgagatccagata 60