Jatropha Genome Database

JcCA0279321.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0279321.10 - phase: 0 /partial
         (471 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c06610                                                            515   e-146

>KJC_c06610 
          Length = 638

 Score =  515 bits (260), Expect = e-146
 Identities = 260/260 (100%)
 Strand = Plus / Minus

                                                                       
Query: 49  gtgccccttattgctgaaatggaatcccttcctgagaggccaagagagccggattgtccg 108
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtgccccttattgctgaaatggaatcccttcctgagaggccaagagagccggattgtccg 201

                                                                       
Query: 109 tacttcctaaaaacaaaaagatgcaagtatggtttgaattgcaaatttaatcatccgaaa 168
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tacttcctaaaaacaaaaagatgcaagtatggtttgaattgcaaatttaatcatccgaaa 141

                                                                       
Query: 169 gacaagttggctttgtttcaaggtggttcagaggataatgatggttttgccttaccggag 228
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gacaagttggctttgtttcaaggtggttcagaggataatgatggttttgccttaccggag 81

                                                                       
Query: 229 aggccgtcagagcccacatgtgcattctatatgaagactgggaaatgcaagtttggagca 288
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80  aggccgtcagagcccacatgtgcattctatatgaagactgggaaatgcaagtttggagca 21

                               
Query: 289 acatgcaaattccatcatcc 308
           ||||||||||||||||||||
Sbjct: 20  acatgcaaattccatcatcc 1