Jatropha Genome Database
- JcCA0279081.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0279081.10 - phase: 0
(900 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03804 1199 0.0
>KJC_c03804
Length = 637
Score = 1199 bits (605), Expect = 0.0
Identities = 635/640 (99%), Gaps = 4/640 (0%)
Strand = Plus / Plus
Query: 117 gcagcctcaagattctgaaaccgatcctccggaacttccgccggattttccgcccgagtc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagcctcaagattctgaaaccgatcctccggaacttccgccggattttccgcccgagtc 60
Query: 177 attttggctgtctaaggatgctgagtacgactggttcgatcgcaacgccttcatcgagcg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attttggctgtctaaggatgctgagtacgactggttcgatcgcaacgccttcatcgagcg 120
Query: 237 caaagactccaccaaaggaaacaactctcactctgctaacttgaatccaaatattatccc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaagactccaccaaaggaaacaactctcactctgctaacttgaatccaaatattatccc 180
Query: 297 acactctggtattcagtcaaattctcaacgattttctaatctgaaatcgaaagcgtccat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acactctggtattcagtcaaattctcaacgattttctaatctgaaatcgaaagcgtccat 240
Query: 357 tcttggtttgccaaagcctcagaaatcttgctttgttgaagccagacgctattgtaaacc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcttggtttgccaaagcctcagaaatcttgctttgttgaagccagacgctattgtaaacc 300
Query: 417 gggaaaaacacggttgttcccgaaacggtccgcttcggtttctaaatcggattcgtcgtt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gggaaaaacacggttgttcccgaaacggtccgcttcggtttctaaatcggattcgtcgtt 360
Query: 477 gattgagccgtcttcgcctaaagtttcttgtatgggaagagtaagatcgaagaaagatcg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gattgagccgtcttcgcctaaagtttcttgtatgggaagagtaagatcgaagaaagatcg 420
Query: 537 gaatcggagactaagaaaccgacaacgatctggacgatcaagtgaaacagacaataaaag 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaatcggagactaagaaaccgacaacgatctggacgatcaagtgaaacagacaataaaag 480
Query: 597 agaaaaagtagaaaggaagcaaagaaccggattcttttcgacctttcgggc-tatttttc 655
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 481 agaaaaagtagaaaggaagcaaagaaccggattc-tttcgacctttcgggcttatttttc 539
Query: 656 gggttactaagcataatacgaggaacagaaaagatggatcattatccagacagggctcga 715
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 540 ggg-tactaagcataatacgaggaacagaaaagatggatcattanccagacagggctcga 598
Query: 716 cggcgaagacgacgattacggacattagagaccggctacc 755
|||||||| |||||||||||||||||||||||||||||||
Sbjct: 599 cggcgaag-cgacgattacggacattagagaccggctacc 637