Jatropha Genome Database
- JcCA0278551.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0278551.10 + phase: 2 /pseudo/partial
(1269 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04618 1479 0.0
>KJC_c04618
Length = 757
Score = 1479 bits (746), Expect = 0.0
Identities = 755/757 (99%), Gaps = 1/757 (0%)
Strand = Plus / Minus
Query: 419 cgagaaaataattctatcatggactttgccagtgaagccaaaattgaaatacctctttat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 cgagaaaataattctatcatggactttgccagtgaagccaaaattgaaatacctctttat 698
Query: 479 cagaatgtgaaatcaaacctttcaacggactttcatctggagaaagagttggggcacata 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 cagaatgtgaaatcaaacctttcaacggactttcatctggagaaagagttggggcacata 638
Query: 539 a-cgttactttgaaatcacctcctgtaggatcaaaagaagtaccttcattaacaaatatc 597
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 aacgttactttgaaatcacctcctgtaggatcaaaagaagtaccttcattaacaaatatc 578
Query: 598 accagtttgagatcaaatggaagttcctctattggttctgctatccatagagatggtgtt 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 accagtttgagatcaaatggaagttcctctattggttctgctatccatagagatggtgtt 518
Query: 658 gcaacttcaaaaaatgatttagcaaagatgaataatcatggaaggaagaagatgagatgt 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gcaacttcaaaaaatgatttagcaaagatgaataatcatggaaggaagaagatgagatgt 458
Query: 718 gagatgcctccaaaatcagtaacatcaataaatgagatggacagtatattagagcgacat 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gagatgcctccaaaatcagtaacatcaataaatgagatggacagtatattagagcgacat 398
Query: 778 cgtcggtcttcacgttcaatgagaccaagatggtcctctccacgagaccgcgagattttg 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cgtcggtcttcacgttcaatgagaccaagatggtcctctccacgagaccgcgagattttg 338
Query: 838 gctgcaagatcacaaattgaaggtgctccagttgcagtgaatgatcgagatctttatgct 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gctgcaagatcacaaattgaaggtgctccagttgcagtgaatgatcgagatctttatgct 278
Query: 898 cctctcttccgaaatgtttccaagtttaaaaggagttacgaactcatggagcgcacactc 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cctctcttccgaaatgtttccaagtttaaaaggagttacgaactcatggagcgcacactc 218
Query: 958 aaagtttatatctatagggatggaaagaaacccatatttcatctaccaatattgaagggg 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 aaagtttatatctatagggatggaaagaaacccatatttcatctaccaatattgaagggg 158
Query: 1018 ttatatgcctcggaaggatggtttatgaaactgatgcaagggaacaagcgttttcttgtg 1077
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ttatatgcctcggaaggatggtttatgaaactgatgcaagggaacaagcgttttcttgtn 98
Query: 1078 aaagaccctcgaaaggctcatctgttttatatgccattcagttctcgaatgctggagtat 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 aaagaccctcgaaaggctcatctgttttatatgccattcagttctcgaatgctggagtat 38
Query: 1138 gcactttatgtgcgtaactcccataatagaacaaatc 1174
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 gcactttatgtgcgtaactcccataatagaacaaatc 1