Jatropha Genome Database
- JcCA0273631.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0273631.30 - phase: 1 /partial
(200 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02448 127 1e-29
KJC_c03906 103 2e-22
KJC_c10306 74 1e-13
KJC_c04805 68 8e-12
KJC_c12118 58 8e-09
>KJC_c02448
Length = 719
Score = 127 bits (64), Expect = 1e-29
Identities = 88/96 (91%)
Strand = Plus / Minus
Query: 48 gcaacaaacagatttgtatgtgagatctgtaacaaagggtttcaaagagatcagaatctt 107
||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 696 gcaacaaacagatttatatgtgagatctgtaacaaaggatttcaaagagatcaaaatctt 637
Query: 108 cagctacatagaagagggcataatctaccatggaag 143
|| || ||||||||||| ||||| || |||||||||
Sbjct: 636 caacttcatagaagaggtcataacctgccatggaag 601
>KJC_c03906
Length = 556
Score = 103 bits (52), Expect = 2e-22
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 63 gtatgtgagatctgtaacaaagggtttcaaagagatcagaatcttcagctacatagaaga 122
||||||||||||||||||||||| ||||||||||||||||||||||| || || ||||||
Sbjct: 550 gtatgtgagatctgtaacaaaggttttcaaagagatcagaatcttcaacttcacagaaga 491
Query: 123 gggcataatctaccatggaa 142
|| ||||| || ||||||||
Sbjct: 490 ggacataaccttccatggaa 471
>KJC_c10306
Length = 589
Score = 73.8 bits (37), Expect = 1e-13
Identities = 115/141 (81%)
Strand = Plus / Minus
Query: 6 ccagatgcagaagtgatggctttatcaccaaagactttaatggcaacaaacagatttgta 65
||||||||||||||||| || |||| || ||||| | |||||||||||||| || ||
Sbjct: 203 ccagatgcagaagtgatagcactatctcccaagacactgatggcaacaaacaggttcata 144
Query: 66 tgtgagatctgtaacaaagggtttcaaagagatcagaatcttcagctacatagaagaggg 125
||||| | || |||||||| ||||||||||| || || || ||||| || ||||||||
Sbjct: 143 tgtgaagtatgcaacaaaggttttcaaagagagcaaaacctacagctccacagaagagga 84
Query: 126 cataatctaccatggaagcta 146
|| || || ||||||||||||
Sbjct: 83 cacaacctcccatggaagcta 63
>KJC_c04805
Length = 897
Score = 67.9 bits (34), Expect = 8e-12
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 25 ctttatcaccaaagactttaatggcaacaaacagatttgtatgtgagatctgtaacaaag 84
|||||||||||| ||| ||| ||| | || | |||| ||| ||||||||||| ||| |||
Sbjct: 776 ctttatcaccaaggacattactggaatcagatagatatgtgtgtgagatctgcaaccaag 717
Query: 85 ggtttcaaagagatcagaatct 106
||||||||||||| ||||||||
Sbjct: 716 ggtttcaaagagaccagaatct 695
>KJC_c12118
Length = 661
Score = 58.0 bits (29), Expect = 8e-09
Identities = 113/141 (80%)
Strand = Plus / Minus
Query: 6 ccagatgcagaagtgatggctttatcaccaaagactttaatggcaacaaacagatttgta 65
||||| ||||| ||||| || |||| || ||||| |||||||||||||||| || ||
Sbjct: 386 ccagacgcagaggtgatagcactatctcccaagacactaatggcaacaaacaggttcata 327
Query: 66 tgtgagatctgtaacaaagggtttcaaagagatcagaatcttcagctacatagaagaggg 125
|||||| | || ||||||||||| || || || || || || ||||| || ||||||||
Sbjct: 326 tgtgaggtatgcaacaaagggttccagagggagcaaaacctacagctccacagaagagga 267
Query: 126 cataatctaccatggaagcta 146
|| || ||||| |||||||||
Sbjct: 266 cacaacctaccttggaagcta 246