Jatropha Genome Database
- JcCA0273541.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0273541.10 - phase: 0 /partial
(873 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01777 1683 0.0
KJC_c00213 127 5e-29
KJC_c07721 66 2e-10
KJC_c10516 64 6e-10
>KJC_c01777
Length = 1112
Score = 1683 bits (849), Expect = 0.0
Identities = 867/873 (99%)
Strand = Plus / Minus
Query: 1 atctctctatcagagcaggagttggtagattgtcctatatcatataaccagggatgcaat 60
||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 938 atctctctatcagagcaggagttggtagattgtgatagatcatataaccagggatgcaat 879
Query: 61 ggaggtcttatggactcctcctttgaatttattatccaaaatggtggtattgatactgaa 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 ggaggtcttatggactatgcctttgaatttattatccaaaatggtggtattgatactgaa 819
Query: 121 caagattacccatatgaggctgttgataatgtttgtgatccatacaggaaaaatgctaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 caagattacccatatgaggctgttgataatgtttgtgatccatacaggaaaaatgctaag 759
Query: 181 gtagttactattgatggatatgaagatgttcctgaaaatgatgagaaatccttgaagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 gtagttactattgatggatatgaagatgttcctgaaaatgatgagaaatccttgaagaag 699
Query: 241 gctgtggcaaatcagccagttagtgttgccattgaagctggtggcagggctttccaactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 gctgtggcaaatcagccagttagtgttgccattgaagctggtggcagggctttccaactt 639
Query: 301 taccaatcgggtgtttttactggtagatgtggtacacagcttgaccatggtgtggctgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 taccaatcgggtgtttttactggtagatgtggtacacagcttgaccatggtgtggctgct 579
Query: 361 gttggatatggcacagagaatggtgtagattactggttggtgaggaactcatggggtcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gttggatatggcacagagaatggtgtagattactggttggtgaggaactcatggggtcct 519
Query: 421 gattggggtgaaagtggttatatcaagttggagcgtaatttggccaccaccacaactgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gattggggtgaaagtggttatatcaagttggagcgtaatttggccaccaccacaactgga 459
Query: 481 aaatgtggaattgcagtggaggcttcatatccaaccaagaagggtccaaatccccctaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aaatgtggaattgcagtggaggcttcatatccaaccaagaagggtccaaatccccctaat 399
Query: 541 cctggcccaacccctccatctccggtcaaccctcctcctccaaagccctccactcagtgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 cctggcccaacccctccatctccggtcaaccctcctcctccaaagccctccactcagtgt 339
Query: 601 gacgattacttttcatgccaagagggaagcacctgctgctgcatatatgagtatggtagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gacgattacttttcatgccaagagggaagcacctgctgctgcatatatgagtatggtagc 279
Query: 661 tattgctttggatggggatgctgccctcttgagtctgcaacctgctgtgatgaccactat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tattgctttggatggggatgctgccctcttgagtctgcaacctgctgtgatgaccactat 219
Query: 721 agctgctgccctcatgatttccctgtctgcgaccttgaagctggaacctgccgattgagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 agctgctgccctcatgatttccctgtctgcgaccttgaagctggaacctgccgattgagt 159
Query: 781 aaggataatccattgagtgtaaaaccattcagacgtagtcctgctcaaagaatcggttct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 aaggataatccattgagtgtaaaaccattcagacgtagtcctgctcaaagaatcggttct 99
Query: 841 caccttcgcggtggcaagaaaattattggtgct 873
|||||||||||||||||||||||||||||||||
Sbjct: 98 caccttcgcggtggcaagaaaattattggtgct 66
>KJC_c00213
Length = 1775
Score = 127 bits (64), Expect = 5e-29
Identities = 328/416 (78%)
Strand = Plus / Minus
Query: 1 atctctctatcagagcaggagttggtagattgtcctatatcatataaccagggatgcaat 60
||||||||||| |||||||||||||| |||||| || || ||||| || |||||||||
Sbjct: 1173 atctctctatctgagcaggagttggtggattgtgatacctcttataatcaaggatgcaat 1114
Query: 61 ggaggtcttatggactcctcctttgaatttattatccaaaatggtggtattgatactgaa 120
|||||||| ||||||| |||| ||||||||||| | |||||||| ||||||||||||
Sbjct: 1113 ggaggtctgatggactatggctttcaatttattatcaacaatggtggcattgatactgaa 1054
Query: 121 caagattacccatatgaggctgttgataatgtttgtgatccatacaggaaaaatgctaag 180
|||||||||| || ||| |||| || || |||||||||||||||| |||
Sbjct: 1053 gaagattacccttaccttgctcgtgatggcagatgcgacacatacaggaaaaatgccaag 994
Query: 181 gtagttactattgatggatatgaagatgttcctgaaaatgatgagaaatccttgaagaag 240
|| ||||| ||||||| ||||||||||| |||| ||| ||||| | | | || |||
Sbjct: 993 gttgttacaattgatgattatgaagatgtacctgttaataatgaggaggcgctaaaaaag 934
Query: 241 gctgtggcaaatcagccagttagtgttgccattgaagctggtggcagggctttccaactt 300
|| || |||||||||||||| ||| |||| ||||||||||| ||||| | ||||| ||
Sbjct: 933 gcggttgcaaatcagccagtgagtattgcaattgaagctggcggcagagaattccagttt 874
Query: 301 taccaatcgggtgtttttactggtagatgtggtacacagcttgaccatggtgtggctgct 360
||| ||||||| | ||||| || | |||||| || || || |||||||| | |||
Sbjct: 873 tactcatcgggtatctttacaggaaaatgtggaacttccctggatcatggtgttgttgcc 814
Query: 361 gttggatatggcacagagaatggtgtagattactggttggtgaggaactcatgggg 416
||||| ||||| ||||| |||||| ||||| |||| | || ||||||||||||||
Sbjct: 813 gttggttatggtacagaaaatggtaaagatttctggattgtcaggaactcatgggg 758
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 473 caactggaaaatgtggaattgcagtggaggcttcatatccaaccaagaagggtccaaatc 532
|||| |||||||||||||||||| ||||||| || ||||||| ||||||||| | |||||
Sbjct: 704 caacaggaaaatgtggaattgcaatggaggcatcttatccaatcaagaagggccaaaatc 645
Query: 533 cccctaatcctggccc 548
|||| |||||||||||
Sbjct: 644 ccccaaatcctggccc 629
Score = 77.8 bits (39), Expect = 4e-14
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 637 tgctgcatatatgagtatggtagctattgctttggatggggatgctgccctcttgagtct 696
|||||||| | ||||||||| | ||| ||||||| ||||||||| ||||| |||||| |
Sbjct: 555 tgctgcatctttgagtatgggaactactgctttgaatggggatgttgcccacttgagggt 496
Query: 697 gcaacctgctgtgatgaccactatagctgctgccc 731
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 495 gctacctgctgtgaagaccattatagttgctgccc 461
>KJC_c07721
Length = 760
Score = 65.9 bits (33), Expect = 2e-10
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 223 gagaaatccttgaagaaggctgtggcaaatcagccagttagtgttgccattgaagctggt 282
|||||||| ||| |||| ||||| |||||||| || || ||||||||||||||||| ||
Sbjct: 188 gagaaatcgttgcagaaagctgtagcaaatcaacctgtcagtgttgccattgaagccagt 247
Query: 283 ggcagggctttccaactttaccaatcgggtgtttttactgg 323
|||| |||||| || | || ||||| ||||| ||||||||
Sbjct: 248 ggcatggctttacagttctatcaatctggtgtgtttactgg 288
>KJC_c10516
Length = 287
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 473 caactggaaaatgtggaattgcagtggaggcttcatatccaaccaagaaggg 524
|||| |||||||||||||||||| ||||||| || ||||||| |||||||||
Sbjct: 152 caacaggaaaatgtggaattgcaatggaggcatcttatccaatcaagaaggg 203