Jatropha Genome Database
- JcCA0272091.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0272091.10 + phase: 0 /partial
(1271 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03843 1189 0.0
KJC_c05693 1140 0.0
KJC_c02432 70 1e-11
>KJC_c03843
Length = 730
Score = 1189 bits (600), Expect = 0.0
Identities = 607/608 (99%), Gaps = 1/608 (0%)
Strand = Plus / Minus
Query: 664 gacattagtgaggagcttgctcagatatcagtattagaggtgaggtacaaatgctcaaag 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gacattagtgaggagcttgctcagatatcagtattagaggtgaggtacaaatgctcaaag 671
Query: 724 caggaggttgaaagagcaattgttgcttgtgagggtgatctgttgaaggcagaagagatc 783
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 670 caggaggttgaaagagcaat-gttgcttgtgagggtgatctgttgaaggcagaagagatc 612
Query: 784 ttacaagcacaaaagctggaacaacctgccactccactaacttctgaagaggttactgat 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttacaagcacaaaagctggaacaacctgccactccactaacttctgaagaggttactgat 552
Query: 844 gccaatgatttgaagagaacgcatgaaaagcccctgtcatcgtcaattacaatacaacag 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gccaatgatttgaagagaacgcatgaaaagcccctgtcatcgtcaattacaatacaacag 492
Query: 904 agaagaaatgagcaggattttaactatgccaaaacatcaattgcactgccaatgtattca 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 agaagaaatgagcaggattttaactatgccaaaacatcaattgcactgccaatgtattca 432
Query: 964 gaacctgggaatagaagcttgcagcctctgaatcagtccagatcgctggcagataagagg 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gaacctgggaatagaagcttgcagcctctgaatcagtccagatcgctggcagataagagg 372
Query: 1024 tggactgctactggaacaagcccttctttttcattaggtatggcatcccctggacaggtg 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tggactgctactggaacaagcccttctttttcattaggtatggcatcccctggacaggtg 312
Query: 1084 acacctcaatcagccaaattggaggtcaggcttggtgtttctggaaatgaagggaaaaat 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 acacctcaatcagccaaattggaggtcaggcttggtgtttctggaaatgaagggaaaaat 252
Query: 1144 catcagcatatactgagggaaccaatagttatgatgcagcgtcgccaatctataaatgcc 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 catcagcatatactgagggaaccaatagttatgatgcagcgtcgccaatctataaatgcc 192
Query: 1204 aaacaaaatcaagtccctagcataagtgcctcaccttctgtaacagctggatggtattca 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aaacaaaatcaagtccctagcataagtgcctcaccttctgtaacagctggatggtattca 132
Query: 1264 aataacgg 1271
||||||||
Sbjct: 131 aataacgg 124
>KJC_c05693
Length = 719
Score = 1140 bits (575), Expect = 0.0
Identities = 612/618 (99%), Gaps = 6/618 (0%)
Strand = Plus / Plus
Query: 1 atgtctccagcatcaaagtccaagaccaagtctaaagataaggcgtctgcaagggctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 atgtctccagcatcaaagtccaagaccaagtctaaagataaggcgtctgcaagggctgcc 163
Query: 61 aaggaacagaaggcatctgacaaatcttctggatctaccaatactgcaagtggtactcct 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 aagga-cagaaggcatctgacaaatcttctggatctaccaatactgcaagtggtactcct 222
Query: 121 gcaagtgcttataatccaatttctgggacatttcataccctagagataccatcagccacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gcaagtgcttataatccaatttctgggacatttcataccctagagataccatcagccacc 282
Query: 181 tcttcccctcatttccatgacaatggtcgtttcagaaatatagatgacacagatgaacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tcttcccctcatttccatgacaatggtcgtttcagaaatatagatgacacagatgaacat 342
Query: 241 tccagtagtccacatggaactgtatccgaatatgattcagtgtcaaacaatggtagttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tccagtagtccacatggaactgtatccgaatatgattcagtgtcaaacaatggtagttgc 402
Query: 301 tctggcgagtcagaagatccaaaagataagacaaccagttctactcggcaggaaaccgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tctggcgagtcagaagatccaaaagataagacaaccagttctactcggcaggaaaccgtg 462
Query: 361 cctggtttagaaaatgacaggcgagagaagattcgtctgaagaatgagaagaagcaccag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cctggtttagaaaatgacaggcgagagaagattcgtctgaagaatgagaagaagcaccag 522
Query: 421 cgccagaaagagaggcgggcacaagagttgcatgagcgttgcagtgggtatctgatgtcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 cgccagaaagagaggcgggcacaagagttgcatgagcgttgcagtgggtatctgatgtcg 582
Query: 481 agaaaattagaagccctttcagagcagcttgtggcaatggggttttctcatgaacgagca 540
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 583 agaaaattagaagccctttcagagcagcttgtggcaatgggg-tttctcatgaacgagca 641
Query: 541 acattggcccttgtgttgaatgagggcagggtagaagaatcagttaactggctttttgaa 600
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 642 acattggcccttgtgttgaatgagggcagggtagaagaatcagttaac-ggc-ttttgaa 699
Query: 601 gggaatgaagaggaagcc 618
|| ||||||||||||||
Sbjct: 700 gg--atgaagaggaagcc 715
>KJC_c02432
Length = 1683
Score = 69.9 bits (35), Expect = 1e-11
Identities = 101/123 (82%)
Strand = Plus / Plus
Query: 399 gaagaatgagaagaagcaccagcgccagaaagagaggcgggcacaagagttgcatgagcg 458
||||||||| | |||||| || || || || |||| ||| || || || |||||||||||
Sbjct: 143 gaagaatgaaaggaagcatcaacgtcaaaaggagaagcgagcccaggaattgcatgagcg 202
Query: 459 ttgcagtgggtatctgatgtcgagaaaattagaagccctttcagagcagcttgtggcaat 518
|| ||||| ||||||||||||||||| ||||||| ||| | |||||||||| |||||
Sbjct: 203 gtgtagtggctatctgatgtcgagaaagctagaagcacttgctcagcagcttgttgcaat 262
Query: 519 ggg 521
|||
Sbjct: 263 ggg 265