Jatropha Genome Database

JcCA0271431.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0271431.10 + phase: 0 
         (651 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10517                                                            910   0.0  

>KJC_c10517 
          Length = 618

 Score =  910 bits (459), Expect = 0.0
 Identities = 480/483 (99%), Gaps = 3/483 (0%)
 Strand = Plus / Plus

                                                                       
Query: 171 tatgatcagcacctccgattcggcagctgcgaatgcagcggttgtatatgaaaa-gctgg 229
           |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1   tatgatcagcac-tccgattcggcagctgcgaatgcagcggttgtatatgaaaaagctgg 59

                                                                       
Query: 230 acgagtggatgaaagattcggtggtggagatagtgaagaatttaagagaagcgccgttgt 289
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  acgagtggatgaaagattcggtggtggagatagtgaagaatttaagagaagcgccgttgt 119

                                                                       
Query: 290 tggttcaggtttacgataaaggcgaaactacagcgttgaagacggaaaa-agcggtagaa 348
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 120 tggttcaggtttacgataaaggcgaaactacagcgttgaagacggaaaaaagcggtagaa 179

                                                                       
Query: 349 gaggaaacatggagtacggtgaaggaaaaatgggggaaaagagagacgccattgccagaa 408
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gaggaaacatggagtacggtgaaggaaaaatgggggaaaagagagacgccattgccagaa 239

                                                                       
Query: 409 ggagttatattcgtggagcaattagatgaagaagatccagaggaaatcacaacgagagca 468
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggagttatattcgtggagcaattagatgaagaagatccagaggaaatcacaacgagagca 299

                                                                       
Query: 469 tggggaatagttgtgcaagggaaaggagtggattgtggacctgtttgttacttgttgaag 528
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tggggaatagttgtgcaagggaaaggagtggattgtggacctgtttgttacttgttgaag 359

                                                                       
Query: 529 acaagtagagttgggtcaggtttaggggctttttgcacccatttctgcttgatgaaggtg 588
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 acaagtagagttgggtcaggtttaggggctttttgcacccatttctgcttgatgaaggtg 419

                                                                       
Query: 589 aagagttttagggaaagtacaaggtctcagcttaagaatttttggttgctggaaggccaa 648
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aagagttttagggaaagtacaaggtctcagcttaagaatttttggttgctggaaggccaa 479

              
Query: 649 tga 651
           |||
Sbjct: 480 tga 482