Jatropha Genome Database
- JcCA0270791.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0270791.10 + phase: 0 /partial
(564 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05481 1072 0.0
>KJC_c05481
Length = 771
Score = 1072 bits (541), Expect = 0.0
Identities = 562/565 (99%), Gaps = 3/565 (0%)
Strand = Plus / Plus
Query: 1 atggctttgggttcaattttgcaatcacagacctctctagatggggaccc-tcgagagca 59
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 168 atggctttgggttcaattt-gcaatcacagacctctctagatggggacccctcgagagca 226
Query: 60 tttatttactgtggacgattttgaatcggatatcggcggttctcaaatcaagttccggat 119
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tttatttactgtggacgattt-gaatcggatatcggcggttctcaaatcaagttccggat 285
Query: 120 aaagaatttgataaagaaatcggatgctggagtaactattcttaacggaattaatttgga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aaagaatttgataaagaaatcggatgctggagtaactattcttaacggaattaatttgga 345
Query: 180 tatacctaaaggagttattgttggaatcattggccctagtggtagcggcaaatctacgct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tatacctaaaggagttattgttggaatcattggccctagtggtagcggcaaatctacgct 405
Query: 240 tttgaggtcgcttaaccgcctatgggaacctccgtctggtaccgtgtttctcgacggccg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tttgaggtcgcttaaccgcctatgggaacctccgtctggtaccgtgtttctcgacggccg 465
Query: 300 tgatatccgggatcttgatgttcttggcctccgccgtagggttggcatgctcttccaggt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tgatatccgggatcttgatgttcttggcctccgccgtagggttggcatgctcttccaggt 525
Query: 360 tccggctctgtttgaaggtacggttgctgataatataaggtatggaccacaattgagggg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tccggctctgtttgaaggtacggttgctgataatataaggtatggaccacaattgagggg 585
Query: 420 gaagaaacttactgaccatgaggttcacaagttgcttaaacttgctgaccttgattctac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gaagaaacttactgaccatgaggttcacaagttgcttaaacttgctgaccttgattctac 645
Query: 480 ttttcacaaaaagaatggtagtgaattatctgtaggtcaagctcaaagggttgcacttgc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ttttcacaaaaagaatggtagtgaattatctgtaggtcaagctcaaagggttgcacttgc 705
Query: 540 aagaaccctagctaatgaaccagag 564
|||||||||||||||||||||||||
Sbjct: 706 aagaaccctagctaatgaaccagag 730