Jatropha Genome Database
- JcCA0270701.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0270701.10 + phase: 2 /pseudo/partial
(616 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c07707 706 0.0
KJC_c02463 147 4e-35
>KJC_c07707
Length = 458
Score = 706 bits (356), Expect = 0.0
Identities = 412/423 (97%), Gaps = 7/423 (1%)
Strand = Plus / Plus
Query: 190 aagagatgttgtttcaagatctatgaccatggaaattcgggagggtcgtgg-agtaggac 248
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 1 aagagatgttgtttcaagatctatgaccatggaaattcgggagggtcgtgggaggtagac 60
Query: 249 ctttgaaggatc--atatctatttgcacttaaatcacttgcccccagatgtgctaaaaga 306
|| |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtt-gaag-atcggatatctatt-gcacttaaatcacttgcccccagatgtgctaaaaga 117
Query: 307 gaggcttcccggtatctctgaaactgctgctatttttgctggtgtggatgttacaaagga 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gaggcttcccggtatctctgaaactgctgctatttttgctggtgtggatgttacaaagga 177
Query: 367 acccattcctgttttacctactgtgcattataatatgggaggaattcccacaaattacca 426
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 acccattcctgttt-acctactgtgcattataatatgggaggaattcccacaaattacca 236
Query: 427 tggagaggtagttactgttaaaggcaatgatcctgatgctgttgttcctggactgatggc 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 tggagaggtagttactgttaaaggcaatgatcctgatgctgttgttcctggactgatggc 296
Query: 487 tgctggagaggcagcctgtgcatcagttcatggtgccaatcgtcttggtgcaaattctct 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tgctggagaggcagcctgtgcatcagttcatggtgccaatcgtcttggtgcaaattctct 356
Query: 547 gcttgacattgttgtttttgggcgagcttgtgcaaacagagtggcagagatcaatagacc 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gcttgacattgttgtttttgggcgagcttgtgcaaacagagtggcagagatcaatagacc 416
Query: 607 agg 609
|||
Sbjct: 417 agg 419
>KJC_c02463
Length = 1078
Score = 147 bits (74), Expect = 4e-35
Identities = 78/80 (97%)
Strand = Plus / Minus
Query: 152 atggaaagatacgctcctacagccaaggatcttgcttcaagagatgttgtttcaagatct 211
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 80 atggaaagntacgctcctacagccaaggatcttgcttcaagngatgttgtttcaagatct 21
Query: 212 atgaccatggaaattcggga 231
||||||||||||||||||||
Sbjct: 20 atgaccatggaaattcggga 1
Score = 119 bits (60), Expect = 8e-27
Identities = 67/68 (98%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 84 caggatcttgagtttgtttcaatttcatcctacaggcatttatggggctggctgcctaat 143
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 caggatcttgagtttgtt-caatttcatcctacaggcatttatggggctggctgcctaat 139
Query: 144 tacagaag 151
||||||||
Sbjct: 138 tacagaag 131