Jatropha Genome Database
- JcCA0270671.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0270671.10 - phase: 0
(1443 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03521 2083 0.0
KJC_c01645 375 e-103
KJC_c09678 103 1e-21
>KJC_c03521
Length = 1265
Score = 2083 bits (1051), Expect = 0.0
Identities = 1077/1082 (99%), Gaps = 4/1082 (0%)
Strand = Plus / Plus
Query: 1 atggtgaagatttgttgtattggtgctggctatgttggtgggcccaccatggcggtgatt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 188 atggtgaagatttgttgtattggtgctggctatgttggtgggcccac-atggcggtgatt 246
Query: 61 gctctgaagtgtccagaaattgaagtagctgtagttgacatttctgtggcacgaatcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gctctgaagtgtccagaaattgaagtagctgtagttgacatttctgtggcacgaatcact 306
Query: 121 gcctggaacagtgagcaactccccatctatgagccaggccttgacggtgtggtgaaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gcctggaacagtgagcaactccccatctatgagccaggccttgacggtgtggtgaaggag 366
Query: 181 tgtagaggaaagaatcttttctttagtactgacgtggaaaaacatgtttcggaggctgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tgtagaggaaagaatcttttctttagtactgacgtggaaaaacatgtttcggaggctgat 426
Query: 241 atagtctttgtatcagttaataccccaaccaaaacccaaggacttggagctggcaaagca 300
||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 427 atagtctttgtatcagttaataccc-aaccaaaacc--aggacttggagctggcaaagca 483
Query: 301 gctgatttgacttattgggagagtgctgctcgaatgattgcagatgtatcaaaatccgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gctgatttgacttattgggagagtgctgctcgaatgattgcagatgtatcaaaatccgat 543
Query: 361 aaaattgttgttgagaaatcaactgtccctgtgaaaacagctgaggcaattgaaaaaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aaaattgttgttgagaaatcaactgtccctgtgaaaacagctgaggcaattgaaaaaatt 603
Query: 421 ttgacccacaacagcaaaggaatcaactttcagattctatcgaaccccgaatttcttgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ttgacccacaacagcaaaggaatcaactttcagattctatcgaaccccgaatttcttgcc 663
Query: 481 gaaggaactgcaattcaagacctttttcatccagatcgtgttctaattggtggcagggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gaaggaactgcaattcaagacctttttcatccagatcgtgttctaattggtggcagggag 723
Query: 541 actccagaaggacaaaaagcaattgaaacattgaaaggtgtttatgcccattgggtccct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 actccagaaggacaaaaagcaattgaaacattgaaaggtgtttatgcccattgggtccct 783
Query: 601 gtggaacaaattatatgcaccaacctttggtctgccgagctctctaaacttgctgcaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 gtggaacaaattatatgcaccaacctttggtctgccgagctctctaaacttgctgcaaat 843
Query: 661 gcctttttggcacagaggatttcctctgtcaatgccatgtcagccctctgtgaagccacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 gcctttttggcacagaggatttcctctgtcaatgccatgtcagccctctgtgaagccacc 903
Query: 721 ggtgcagacgttgccgaagtttcacatgctgttggtaaggacacaagaattgggcccaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 ggtgcagacgttgccgaagtttcacatgctgttggtaaggacacaagaattgggcccaag 963
Query: 781 ttcttgaatgctagtgtgggttttggtggatcttgtttccagaaagatattttgaacttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 ttcttgaatgctagtgtgggttttggtggatcttgtttccagaaagatattttgaacttg 1023
Query: 841 gtctatatttgcgagtgcaatggtcttcctgaggttgcgaattactggaaacaggtaatt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 gtctatatttgcgagtgcaatggtcttcctgaggttgcgaattactggaaacaggtaatt 1083
Query: 901 aaggtaaatgactaccagaagacccgcttcgtgaaccgtgtggtttcttcaatgttcaac 960
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1084 aaggtaaatgactaccagaagacccgcttcgtgagccgtgtggtttcttcaatgttcaac 1143
Query: 961 acagtttcaggaaagaagattgcaattttgggatttgctttcaagaaagacactggtgat 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 acagtttcaggaaagaagattgcaattttgggatttgctttcaagaaagacactggtgat 1203
Query: 1021 actagggagacccctgctatcgatgtttgcaagggcttattgggcgacaaagctcaactg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 actagggagacccctgctatcgatgtttgcaagggcttattgggcgacaaagctcaactg 1263
Query: 1081 ag 1082
||
Sbjct: 1264 ag 1265
>KJC_c01645
Length = 1046
Score = 375 bits (189), Expect = e-103
Identities = 754/941 (80%), Gaps = 1/941 (0%)
Strand = Plus / Minus
Query: 1 atggtgaagatttgttgtattggtgctggctatgttggtgggcccaccatggcggtgatt 60
||||||||||| ||||| ||||| || || ||||| |||||||| || ||||| || |||
Sbjct: 1004 atggtgaagatctgttgcattggagcaggatatgtcggtgggcctacaatggcagtcatt 945
Query: 61 gctctgaagtgtccagaaattgaagtagctgtagttgacatttctgtggcacgaatcact 120
|| || |||||||| |||||||||||||| ||||| || ||| | || | |
Sbjct: 944 gcactcaagtgtccgtcgattgaagtagctgttgttgatatctctcaacataggattaat 885
Query: 121 gcctggaacagtgagcaactccccatctatgagccaggccttgacggtgtggtgaaggag 180
|||||||||||||| || || ||||| ||||||||||||||||| | ||||||||| |
Sbjct: 884 gcctggaacagtgaccagctgcccatttatgagccaggccttgatgacgtggtgaagcgg 825
Query: 181 tgtagaggaaagaatcttttctttagtactgacgtggaaaaacatgtttcggaggctgat 240
|| |||| | ||| || ||||| || ||| ||||| |||||||| || |||||||||
Sbjct: 824 tgccgaggcaggaacctcttcttcagcgttgatgtggagaaacatgtctctgaggctgat 765
Query: 241 atagtctttgtatcagttaataccccaaccaaaacccaaggacttggagctggcaaagca 300
|||||||| || || || || || || |||||||| | ||||| || ||||| |||||
Sbjct: 764 atagtcttcgtttctgtcaacactccgaccaaaactcgcggactgggggctggtaaagct 705
Query: 301 gctgatttgacttattgggagagtgctgctcgaatgattgcagatgtatcaaaatccgat 360
|||||| |||| || ||||||||||| || || |||||||| ||||| ||||| || |
Sbjct: 704 gctgatctgacatactgggagagtgcagcgcgtatgattgctgatgtctcaaagtcaaac 645
Query: 361 aaaattgttgttgagaaatcaactgtccctgtgaaaacagctgaggcaattgaaaaaatt 420
|||||||| |||||||||||||||||||| || || || || ||||||||||||||||||
Sbjct: 644 aaaattgtggttgagaaatcaactgtcccagttaagacggcagaggcaattgaaaaaatt 585
Query: 421 ttgacccacaacagcaaaggaatcaactttcagattctatcgaaccccgaatttcttgcc 480
||||||||||||||||| || ||||| || ||||| || || ||||| || || |||||
Sbjct: 584 ttgacccacaacagcaaggggatcaaattccagatcctctcaaacccagagttccttgct 525
Query: 481 gaaggaactgcaattcaagacctttttcatccagatcgtgttctaattggtggcagggag 540
|| ||||||||||| || || ||| | |||||| | ||||| ||||| || |||||
Sbjct: 524 gagggaactgcaatcagcgatctgtttaacccagatagagttcttattggaggaagggaa 465
Query: 541 actccagaaggacaaaaagcaattgaaacattgaaaggtgtttatgcccattgggtccct 600
|| |||||||| ||| |||| || || ||||||| | ||||||||| |||||||| |||
Sbjct: 464 accccagaaggtcaagaagccatcaaagcattgaaggatgtttatgctcattgggtacct 405
Query: 601 gtggaacaaattatatgcaccaacctttggtctgccgagctctctaaacttgctgcaaat 660
| || | ||| || ||||||||||||||| || ||||| || || ||||| || |||
Sbjct: 404 gaagatcgcattctaaccaccaacctttggtccgcagagctgtccaagcttgcagccaat 345
Query: 661 gcctttttggcacagaggatttcctctgtcaatgccatgtcagccctctgtgaagccacc 720
||||| ||||| |||||||| || || || ||||| ||||| || || ||||| || ||
Sbjct: 344 gccttcttggcccagaggatctcatccgttaatgctatgtctgcactatgtgaggcaact 285
Query: 721 ggtgcagacgttgccgaagtttcacatgctgttggtaaggacacaagaattgggcccaag 780
|| ||||| ||| |||| |||||| |||||||||| |||||||| |||||||| ||||||
Sbjct: 284 ggggcagatgttaccgaggtttcatatgctgttggcaaggacactagaattggtcccaag 225
Query: 781 ttcttgaatgctagtgtgggttttggtggatcttgtttccagaaagatattttgaacttg 840
|| ||||||||||| || ||||||||||| || || |||||||| || ||||||||| |
Sbjct: 224 tttttgaatgctagcgttggttttggtgggtcctgcttccagaaggacattttgaacctt 165
Query: 841 gtctatatttgcgagtgcaatggtcttcctgaggttgcgaattactggaaacaggtaatt 900
|| || || |||||||||||||| ||||| || || || | || |||||||| |||||
Sbjct: 164 gtatacatctgcgagtgcaatggccttccagatgtggcagagtattggaaacaagtaatc 105
Query: 901 aaggtaaatgactaccagaagacccgcttcgtgaaccgtgt 941
||| | ||||| || || |||| ||| ||||||||||||||
Sbjct: 104 aagatcaatgattatcaaaaga-ccgattcgtgaaccgtgt 65
>KJC_c09678
Length = 306
Score = 103 bits (52), Expect = 1e-21
Identities = 164/200 (82%), Gaps = 1/200 (0%)
Strand = Plus / Minus
Query: 619 accaacctttggtctgccgagctctctaaacttgctgcaaatgcctttttggcacagagg 678
||||| ||||||||||| ||| | || || | |||||||||||||||| | |||| ||
Sbjct: 256 accaatctttggtctgcagagttgtcaaagttagctgcaaatgccttttag-cacaaaga 198
Query: 679 atttcctctgtcaatgccatgtcagccctctgtgaagccaccggtgcagacgttgccgaa 738
||||| ||||||||||| |||||||| || || ||||| || || ||||| ||| | |
Sbjct: 197 atttcttctgtcaatgcaatgtcagctctttgcgaagcaactggagcagatgtttcgcag 138
Query: 739 gtttcacatgctgttggtaaggacacaagaattgggcccaagttcttgaatgctagtgtg 798
||||| |||||||||||||| |||||||||||||| || || || ||||| || |||||
Sbjct: 137 gtttctcatgctgttggtaaagacacaagaattggaccaaaatttttgaacgccagtgtt 78
Query: 799 ggttttggtggatcttgttt 818
|||||||| ||||| |||||
Sbjct: 77 ggttttggcggatcctgttt 58