Jatropha Genome Database
- JcCA0268721.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0268721.10 + phase: 0 /partial
(865 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00836 1501 0.0
>KJC_c00836
Length = 1128
Score = 1501 bits (757), Expect = 0.0
Identities = 785/797 (98%)
Strand = Plus / Plus
Query: 69 cccgttgaaatgggaacagaagttggaagctgctgcgaaggcaaaggctgaagctgaagc 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cccgttgaaatgggaacagaagttggaagctgctgcgaaggcaaaggctgaagctgaagc 335
Query: 129 caaagagaggaagcagaaagctgcaaagcgcaaaagaagatctgtttcaaaatctgatac 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 caaagagaggaagcagaaagctgcaaagcgcaaaagaagatctgtttcaaaatctgatac 395
Query: 189 tgacagtgatagcgacagtaatgatgggagaaagtctaggaaaagatcccataggaaaca 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tgacagtgatagcgacagtaatgatgggagaaagtctaggaaaagatcccataggaaaca 455
Query: 249 cagaaagcatgcccactctgattcaggtgacaatgagaagaggagggnnnnnnnntccaa 308
||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 456 cagaaagcatgcccactctgattcaggtgacaatgagaagaggagggaaaaaaaatccaa 515
Query: 309 gcgtaagccaaagagacggtcctcggattcaaatgatgacagtagtgacggttttgagag 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gcgtaagccaaagagacggtcctcggattcaaatgatgacagtagtgacggttttgagag 575
Query: 369 tgattctgaggaagaaaggagaaggaagaagagaaatcataggagacacgggcatcacta 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tgattctgaggaagaaaggagaaggaagaagagaaatcataggagacacgggcatcacta 635
Query: 429 ttcaagattggattccagttcttttgatcgttcaagcgacgatgatgacatggcaatcaa 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ttcaagattggattccagttcttttgatcgttcaagcgacgatgatgacatggcaatcaa 695
Query: 489 aaggagaagccatgcgaagcatcaccgacgccaccagcaatcgcaatctagtgtttcaga 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 aaggagaagccatgcgaagcatcaccgacgccaccagcaatcgcaatctagtgtttcaga 755
Query: 549 ttcttcaagtgatgaggacaatggagcaaacaggagaagtcattcgaaacaccacaagca 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ttcttcaagtgatgaggacaatggagcaaacaggagaagtcattcgaaacaccacaagca 815
Query: 609 tcactgtaggtctagtgattcagatttatcaagtgatgaagatagggaaagccgagcaac 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 tcactgtaggtctagtgattcagatttatcaagtgatgaagatagggaaagccgagcaac 875
Query: 669 acatcataaacgtcaccagcgatcccaaagcatggactcaagctcctcaggttttgatgt 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 acatcataaacgtcaccagcgatcccaaagcatggactcaagctcctcaggttttgatgt 935
Query: 729 ctataacagtgaccggaggagtgcatctctaggaaagtctactgatgacagcaacgaaga 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 ctataacagtgaccggaggagtgcatctctaggaaagtctactgatgacagcaacgaaga 995
Query: 789 agctgataaaaaatcaaggcacaggaggtctggtcaccatcactacactcatcacaagca 848
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 996 agctgataaaaaatcaaggcacacagggtttggtcaccatcactacactcatcacaagca 1055
Query: 849 tcgttcccatcattcaa 865
|||||||||||||||||
Sbjct: 1056 tcgttcccatcattcaa 1072
Score = 60.0 bits (30), Expect = 9e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 atggactgcaagaagttcatccaattggtt 30
||||||||||||||||||||||||||||||
Sbjct: 209 atggactgcaagaagttcatccaattggtt 238