Jatropha Genome Database
- JcCA0262281.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0262281.10 + phase: 0
(381 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00045 755 0.0
KJC_s18631 507 e-144
>KJC_c00045
Length = 8315
Score = 755 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Minus
Query: 1 atgaatggggagtccgctttgaaagcgtccgccctgcaaccacccccgagtatatgcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2944 atgaatggggagtccgctttgaaagcgtccgccctgcaaccacccccgagtatatgcttc 2885
Query: 61 aacaggaattacacaagggtagttgatacaatagaaacctctggtaaaatgcccgcccgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2884 aacaggaattacacaagggtagttgatacaatagaaacctctggtaaaatgcccgcccgt 2825
Query: 121 aacccaacagataaagtacattacatagtccgttttagggattggcgacttacccattca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2824 aacccaacagataaagtacattacatagtccgttttagggattggcgacttacccattca 2765
Query: 181 gtgactttggcactggatgttccaaaaagaaaatgggtactctcgggtcgggtgaattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2764 gtgactttggcactggatgttccaaaaagaaaatgggtactctcgggtcgggtgaattca 2705
Query: 241 ataatagacgtctgttggcattccagccttccttctcctttcagggcctatccgaaagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2704 ataatagacgtctgttggcattccagccttccttctcctttcagggcctatccgaaagag 2645
Query: 301 aatccagtacttcttggtcgtgaatatctgaataggacaaaccgccccgtggatatcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2644 aatccagtacttcttggtcgtgaatatctgaataggacaaaccgccccgtggatatcttt 2585
Query: 361 gcttcggaacaaaacaattag 381
|||||||||||||||||||||
Sbjct: 2584 gcttcggaacaaaacaattag 2564
>KJC_s18631
Length = 492
Score = 507 bits (256), Expect = e-144
Identities = 270/272 (99%), Gaps = 2/272 (0%)
Strand = Plus / Minus
Query: 110 tgcccgcccgtaacccaacagataaagtacattacatagtccgttttagggattggcgac 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tgcccgcccgtaacccaacagataaagtacattacatagtccgttttagggattggcgac 433
Query: 170 ttacccattcagtgactttggcactggatgttccaaaaagaaaatgggtactctcgggtc 229
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 432 ttacccattcagtgactttggcactggatgttccaaaaag-aaatgggtactctcgggtc 374
Query: 230 gggtgaattcaataatagacgtctgttggcattccagccttccttctcctttcagggcct 289
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 373 gggtgaattcaataatagacgtctgttggcattccagccttccttctcc-ttcagggcct 315
Query: 290 atccgaaagagaatccagtacttcttggtcgtgaatatctgaataggacaaaccgccccg 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atccgaaagagaatccagtacttcttggtcgtgaatatctgaataggacaaaccgccccg 255
Query: 350 tggatatctttgcttcggaacaaaacaattag 381
||||||||||||||||||||||||||||||||
Sbjct: 254 tggatatctttgcttcggaacaaaacaattag 223