Jatropha Genome Database
- JcCA0261151.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0261151.10 - phase: 0 /partial
(1271 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c07929 1752 0.0
>KJC_c07929
Length = 1106
Score = 1752 bits (884), Expect = 0.0
Identities = 923/935 (98%), Gaps = 3/935 (0%)
Strand = Plus / Minus
Query: 328 gttagtgcaaatctcgataccaagacgggattggagaaggggacg-ataaaaggatatgc 386
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1106 gttagtgcaaatctcgataccaagacgggattggagaaggggacggataaaaggatatgc 1047
Query: 387 tcaccggaaagataagcatggatcagaaatccggtatgaagcagacttcgtagttcctga 446
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 tcnccggaaagataagcatggatcagaaatccggtatgaagcagacttcgtagttcctga 987
Query: 447 tagttttggagaagtaggagctattttagttgaaaatgagcaccataaggagatgttcat 506
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 986 nagttttggagaagtaggagc-attttagttgaaaatgagcaccataaggagatgttcat 928
Query: 507 caaggacataacccttgacggcttccttgctggtcctgttcatctggcttgtgattcctg 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 caaggacataacccttgacggcttccttgctggtcctgttcatctggcttgtgattcctg 868
Query: 567 ggttcaggccaagtcaaccgacaagcggaaaaggcttttcttcactaacaagtcatactt 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 ggttcaggccaagtcaaccgacaagcggaaaaggcttttcttcactaacaagtcatactt 808
Query: 627 gccatcacaaacgccagatggactaagaaggctgagagaagaagagcttgttcttctgag 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 gccatcacaaacgccagatggactaagaaggctgagagaagaagagcttgttcttctgag 748
Query: 687 aggcgacggtcaaggagagcgcaagaaaggcgagagagtatacgattacgacgtctacaa 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 aggcgacggtcaaggagagcgcaagaaaggcgagagagtatacgattacgacgtctacaa 688
Query: 747 tgatctaggcgaccctgacaatgactcagacactaaaagaccggtgcttggcggcaaaca 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tgatctaggcgaccctgacaatgactcagacactaaaagaccggtgcttggcggcaaaca 628
Query: 807 gcttccttaccctagacgctgcagaacaggaaggccaaggtgcaagacggacccattgtc 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gcttccttaccctagacgctgcagaacaggaaggccaaggtgcaagacggacccattgtc 568
Query: 867 ggagtcgaggagcagttccgtttatgtgcctcgagacgaagaattctcagaagtgaagga 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ggagtcgaggagcagttccgtttatgtgcctcgagacgaagaattctcagaagtgaagga 508
Query: 927 gctcactttctccgccaagacactttactcagctttgcatgcggtgcttccctcaataga 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gctcactttctccgccaagacactttactcagctttgcatgcggtgcttccctcaataga 448
Query: 987 gacttcaatagtagactccacccttccatttccatttttcagtgaaatagatgatctgtt 1046
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gacttcaatagtagactcca-ccttccatttccatttttcagtgaaatagatgatctgtt 389
Query: 1047 caatgaaggagtcaatttacctcctcttaaaggccaaggcttgaaacatattctgcctaa 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 caatgaaggagtcaatttacctcctcttaaaggccaaggcttgaaacatattctgcctaa 329
Query: 1107 tattattaaggctatcggagatgaagctgacagcatcttgcgttttgagaccccgcaaac 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tattattaaggctatcggagatgaagctgacagcatcttgcgttttgagaccccgcaaac 269
Query: 1167 tatggagagagacagannnnnnnggttaagggatgaggaattcggtaggcagactcttgc 1226
|||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 268 tatggagagagacagatttttttggttaagggatgaggaattcggtaggcagactcttgc 209
Query: 1227 aggactcaacccattgagcataaaattggtcacag 1261
|||||||||||||||||||||||||||||||||||
Sbjct: 208 aggactcaacccattgagcataaaattggtcacag 174