Jatropha Genome Database
- JcCA0259751.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0259751.10 + phase: 0 /partial
(870 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03651 854 0.0
KJC_c03980 755 0.0
KJC_c01932 706 0.0
KJC_s13855 323 4e-88
>KJC_c03651
Length = 772
Score = 854 bits (431), Expect = 0.0
Identities = 438/439 (99%), Gaps = 1/439 (0%)
Strand = Plus / Plus
Query: 432 ttcttcagataagaagagagtggaggcattggagcatcttggtgctgatgagtatttagt 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 ttcttcagataagaagagagtggaggcattggagcatcttggtgctgatgagtatttagt 96
Query: 492 tagttcagacacaactaagatgcaagaagctgctgattctcttgattatataattgacac 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tagttcagacacaactaagatgcaagaagctgctgattctcttgattatataattgacac 156
Query: 552 tgtgcctgttggtcatcctcttgagccttatctttctttgttgaaacttgatgggaagct 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tgtgcctgttggtcatcctcttgagccttatctttctttgttgaaacttgatgggaagct 216
Query: 612 gattttgatgggtgttattaataccccattacagtttgtcagtcctatggttatgcttgg 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gattttgatgggtgttattaataccccattacagtttgtcagtcctatggttatgcttgg 276
Query: 672 gagaaagatgattacaggaagtttcataggaagcatgaaagaaacagaggagatgcttga 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gagaaagatgattacaggaagtttcataggaagcatgaaagaaacagaggagatgcttga 336
Query: 732 tttctgcagggaaaagggagtaacatcaatgattgaagttgtcaaaatggattacatcaa 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tttctgcagggaaaagggagtaacatcaatgattgaagttgtcaaaatggattacatcaa 396
Query: 792 caaagctttggaaaggctcgagaacaacgacgtcagatataggtttgtggtggacgttgc 851
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 397 caaagctttggaaaggctcgagaacaacgacgtcagatatagg-ttgtggtggacgttgc 455
Query: 852 aggcagcaagcttgaggaa 870
|||||||||||||||||||
Sbjct: 456 aggcagcaagcttgaggaa 474
>KJC_c03980
Length = 458
Score = 755 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Plus
Query: 1 atgggcagcattgaaacagagagagctactgttggatgggctgcaagagacccatctggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atgggcagcattgaaacagagagagctactgttggatgggctgcaagagacccatctggg 137
Query: 61 attctttctccttatacctatactcttagaaacacaggcccagaagatgttttgataaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 attctttctccttatacctatactcttagaaacacaggcccagaagatgttttgataaag 197
Query: 121 gttctctgttgtggagtctgtcacactgatattcatcagatcaaaaatgatcttggcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gttctctgttgtggagtctgtcacactgatattcatcagatcaaaaatgatcttggcatg 257
Query: 181 tcacgctaccctatggtccctgggcatgaagtggttggtgaggtggtggacgtaggatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tcacgctaccctatggtccctgggcatgaagtggttggtgaggtggtggacgtaggatca 317
Query: 241 gaagtgacgaaatttacagtaggagatgtagttggagttggagtaattgttggatgctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gaagtgacgaaatttacagtaggagatgtagttggagttggagtaattgttggatgctgc 377
Query: 301 aggaattgccatccatgtaaatcagatattgagcagtattgcaacaagaaaatctggtct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aggaattgccatccatgtaaatcagatattgagcagtattgcaacaagaaaatctggtct 437
Query: 361 tacaatgatgtttacacagat 381
|||||||||||||||||||||
Sbjct: 438 tacaatgatgtttacacagat 458
>KJC_c01932
Length = 598
Score = 706 bits (356), Expect = 0.0
Identities = 359/360 (99%)
Strand = Plus / Minus
Query: 72 ttatacctatactcttagaaacacaggcccagaagatgttttgataaaggttctctgttg 131
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttatgcctatactcttagaaacacaggcccagaagatgttttgataaaggttctctgttg 475
Query: 132 tggagtctgtcacactgatattcatcagatcaaaaatgatcttggcatgtcacgctaccc 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tggagtctgtcacactgatattcatcagatcaaaaatgatcttggcatgtcacgctaccc 415
Query: 192 tatggtccctgggcatgaagtggttggtgaggtggtggacgtaggatcagaagtgacgaa 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tatggtccctgggcatgaagtggttggtgaggtggtggacgtaggatcagaagtgacgaa 355
Query: 252 atttacagtaggagatgtagttggagttggagtaattgttggatgctgcaggaattgcca 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 atttacagtaggagatgtagttggagttggagtaattgttggatgctgcaggaattgcca 295
Query: 312 tccatgtaaatcagatattgagcagtattgcaacaagaaaatctggtcttacaatgatgt 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tccatgtaaatcagatattgagcagtattgcaacaagaaaatctggtcttacaatgatgt 235
Query: 372 ttacacagatggaaaacctactcaaggcggctttgcccaatccatgattgtagatcaaaa 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ttacacagatggaaaacctactcaaggcggctttgcccaatccatgattgtagatcaaaa 175
Score = 129 bits (65), Expect = 1e-29
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 1 atgggcagcattgaaacagagagagctactgttggatgggctgcaagagacccatctggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 atgggcagcattgaaacagagagagctactgttggatgggctgcaagagacccatctggg 593
Query: 61 attct 65
|||||
Sbjct: 594 attct 598
>KJC_s13855
Length = 391
Score = 323 bits (163), Expect = 4e-88
Identities = 163/163 (100%)
Strand = Plus / Plus
Query: 708 gaaagaaacagaggagatgcttgatttctgcagggaaaagggagtaacatcaatgattga 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gaaagaaacagaggagatgcttgatttctgcagggaaaagggagtaacatcaatgattga 253
Query: 768 agttgtcaaaatggattacatcaacaaagctttggaaaggctcgagaacaacgacgtcag 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agttgtcaaaatggattacatcaacaaagctttggaaaggctcgagaacaacgacgtcag 313
Query: 828 atataggtttgtggtggacgttgcaggcagcaagcttgaggaa 870
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atataggtttgtggtggacgttgcaggcagcaagcttgaggaa 356