Jatropha Genome Database

JcCA0259681.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0259681.10 + phase: 0 /partial
         (399 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c06610                                                            428   e-120

>KJC_c06610 
          Length = 638

 Score =  428 bits (216), Expect = e-120
 Identities = 228/231 (98%), Gaps = 2/231 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgggtgcccataacattattgggcaaagtgaagcttggtattctaccagctccctagcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 486 atgggtgcccataacattattgggcaaagtgaagcttggtattctaccagccccctagcc 427

                                                                       
Query: 61  aagcgttatagattcgagagtgcaagcaatttgcctatatatccacagaggccaggagag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aagcgttatagattcgagagtgcaagcaatttgcctatatatccacagaggccaggagag 367

                                                                       
Query: 121 aaggattgcgcccactatatgctcacacgaacctgtaaatttggagatagctgcaagttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaggattgcgcccactatatgctcacacgaacctgtaaatttggagatagctgcaagttt 307

                                                              
Query: 181 gaccatcctgtttgggttcctgagggtggaatcccaaattggaaagaggtg 231
           |||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 306 gaccatcctgtttgg--tcctgagggtggaatcccaaattggaaagaggtg 258