Jatropha Genome Database
- JcCA0259521.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0259521.10 - phase: 0 /partial
(707 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02448 1015 0.0
KJC_c07289 252 1e-66
KJC_c06446 224 2e-58
KJC_c03906 172 7e-43
KJC_c12118 125 2e-28
KJC_c03168 115 1e-25
KJC_c10306 88 3e-17
KJC_c05837 64 5e-10
KJC_c04805 50 7e-06
>KJC_c02448
Length = 719
Score = 1015 bits (512), Expect = 0.0
Identities = 518/520 (99%)
Strand = Plus / Minus
Query: 188 ctttgtctccaaaaacactattagcaacaaacagatttatatgtgagatctgtaacaaag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 ctttgtctccaaaaacactattagcaacaaacagatttatatgtgagatctgtaacaaag 660
Query: 248 gatttcaaagagatcaaaatcttcaacttcatagaagaggtcataacctgccatggaagt 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gatttcaaagagatcaaaatcttcaacttcatagaagaggtcataacctgccatggaagt 600
Query: 308 taaagcaaagaacaaacaaggaagtgaggaagaaggtatatgtatgtccagaagctacat 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 taaagcaaagaacaaacaaggaagtgaggaagaaggtatatgtatgtccagaagctacat 540
Query: 368 gtgtacatcatgacccatcaagagctctaggagaccttacaggaatcaaaaaacacttta 427
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 539 gtgtacatcatgacccatcaagagctctaggagaccttacaggaatcaaaaacaacttta 480
Query: 428 gcagaaagcatggtgagaagaagtggaagtgtgaaaagtgctctaaacgttatgccgttc 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gcagaaagcatggtgagaagaagtggaagtgtgaaaagtgctctaaacgttatgccgttc 420
Query: 488 aatctgactggaaagcccattccaagatttgtggcacaagagagtatagatgtgattgcg 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 aatctgactggaaagcccattccaagatttgtggcacaagagagtatagatgtgattgcg 360
Query: 548 gaacccttttctctaggagagacagtttcatcacacacagagccttctgtgatgcattag 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gaacccttttctctaggagagacagtttcatcacacacagagccttctgtgatgcattag 300
Query: 608 cagaagagagtgcaagagccataacattaaatccttcctcttcttcaacttctaatcata 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cagaagagagtgcaagagccataacattaaatccttcctcttcttcaacttctaatcata 240
Query: 668 tgatcaatttgcaagccctatcatcagtcaaaagggagca 707
||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgatcaatttgcaagccctatcatcagtcaaaagggagca 200
>KJC_c07289
Length = 491
Score = 252 bits (127), Expect = 1e-66
Identities = 130/131 (99%)
Strand = Plus / Minus
Query: 1 atggatgagaacatctccaatttgacttctgcttctggtgaaataagtgcttcttctcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atggatgagaacatctccaatttgacttctgcttctggtgaaataagtgcttcttctcgt 72
Query: 61 agcagaattgaaacttccactttgtactctcaacagtcttttcctccatcaaatcaatcc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 agcagaattgaaacttccactttgtactctcaacagtcttttcctccatcaaatcaatca 12
Query: 121 ccaccacctcc 131
|||||||||||
Sbjct: 11 ccaccacctcc 1
>KJC_c06446
Length = 815
Score = 224 bits (113), Expect = 2e-58
Identities = 225/261 (86%), Gaps = 1/261 (0%)
Strand = Plus / Minus
Query: 367 tgtgtacatcatgacccatcaagagctctaggagaccttacaggaatcaaaaaacacttt 426
||||| ||||||||||||||||| ||||| |||||| | ||||||||||| || ||||||
Sbjct: 370 tgtgtccatcatgacccatcaagggctcttggagacttaacaggaatcaagaagcacttt 311
Query: 427 agcagaaagcatggtgagaagaagtgg-aagtgtgaaaagtgctctaaacgttatgccgt 485
|||||||||||||||||||||||||| || ||||| |||||||| || | ||||| ||
Sbjct: 310 tgcagaaagcatggtgagaagaagtgggaaatgtgataagtgctcaaagaggtatgcggt 251
Query: 486 tcaatctgactggaaagcccattccaagatttgtggcacaagagagtatagatgtgattg 545
|||||| || |||||||| || ||||| | |||||||| ||||| || |||||||| ||
Sbjct: 250 tcaatcagattggaaagctcactccaaaacatgtggcactagagaatacagatgtgactg 191
Query: 546 cggaacccttttctctaggagagacagtttcatcacacacagagccttctgtgatgcatt 605
||||| |||||||| ||||| |||||||| ||||| |||||||| ||||||||||| ||
Sbjct: 190 tggaactcttttctcaaggagggacagttttatcacccacagagctttctgtgatgcttt 131
Query: 606 agcagaagagagtgcaagagc 626
|||||| ||||||||||||||
Sbjct: 130 agcagaggagagtgcaagagc 110
>KJC_c03906
Length = 556
Score = 172 bits (87), Expect = 7e-43
Identities = 324/399 (81%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 227 tatgtgagatctgtaacaaaggatttcaaagagatcaaaatcttcaacttcatagaagag 286
|||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||
Sbjct: 549 tatgtgagatctgtaacaaaggttttcaaagagatcagaatcttcaacttcacagaagag 490
Query: 287 gtcataacctgccatgg-aagttaaagcaaagaacaaacaaggaagtgaggaagaaggta 345
| |||||||| |||||| || | ||||||||||| | ||| ||| | | |||| | |
Sbjct: 489 gacataaccttccatggaaactgaaagcaaagaaacagcaaagaaat-aaaaagagagca 431
Query: 346 tatgtatgtccagaagctacatgtgtacatcatgacccatcaagagctctaggagacctt 405
||||| ||||| ||| | | ||||| |||||| | || || |||||||| || ||||||
Sbjct: 430 tatgtttgtcctgaaccatcttgtgttcatcatcatccttctagagctcttggtgacctt 371
Query: 406 acaggaatcaaaaaacactttagcagaaagcatggtgagaagaagtggaagtgtgaaaag 465
||||| ||| | ||||||| | ||||| ||||| || ||||| ||||| ||||||||
Sbjct: 370 acaggtatc-agaaacactactgtagaaaacatggagaaaagaaatggaaatgtgaaaaa 312
Query: 466 tgctctaaacgttatgccgttcaatctgactggaaagcccattccaagatttgtggcaca 525
|| || || || || ||||||||||| |||||||| ||||| || | |||||| ||
Sbjct: 311 tgttcaaagatctacgctgttcaatctgattggaaagctcattctaaaacttgtggaact 252
Query: 526 agagagtatagatgtgattgcggaacccttttctctaggagagacagtttcatcacacac 585
||||||||||||||||| || |||||||||||||| |||| || || ||||| || ||
Sbjct: 251 agagagtatagatgtgactgtggaacccttttctccaggaaggatagcttcataacccat 192
Query: 586 agagccttctgtgatgcattagcagaagagagtgcaaga 624
|||| || |||||||||||||| ||||| |||||||||
Sbjct: 191 cgagcattttgtgatgcattagctgaagaaagtgcaaga 153
>KJC_c12118
Length = 661
Score = 125 bits (63), Expect = 2e-28
Identities = 298/375 (79%), Gaps = 1/375 (0%)
Strand = Plus / Minus
Query: 169 ccagaagcagaagtgatagctttgtctccaaaaacactattagcaacaaacagatttata 228
||||| ||||| |||||||| | ||||| || |||||| | ||||||||||| || |||
Sbjct: 386 ccagacgcagaggtgatagcactatctcccaagacactaatggcaacaaacaggttcata 327
Query: 229 tgtgagatctgtaacaaaggatttcaaagagatcaaaatcttcaacttcatagaagaggt 288
|||||| | || |||||||| || || || || ||||| || || || || ||||||||
Sbjct: 326 tgtgaggtatgcaacaaagggttccagagggagcaaaacctacagctccacagaagagga 267
Query: 289 cataacctgccatggaagttaaagcaaagaacaaacaaggaagtgaggaagaaggtatat 348
|| ||||| || |||||| ||||||| | ||| | || ||||||| || ||| || |||
Sbjct: 266 cacaacctaccttggaagctaaagcagaaaactacaaaagaagtgaagaggaaagtgtat 207
Query: 349 gtatgtccagaagctacatgtgtacatcatgacccatcaagagctctaggagaccttaca 408
|||| || ||| | ||||| || || |||||||| || || ||||| || ||||||||
Sbjct: 206 ttatgccctgaacccacatgcgtccaccatgacccttctagggctcttggtgaccttact 147
Query: 409 ggaatcaaaaaacactttagcagaaagcatggtgag-aagaagtggaagtgtgaaaagtg 467
|| ||||| ||||||| | ||||| ||||||||| || || ||||||||||| || ||
Sbjct: 146 ggtatcaagaaacactattcaagaaaacatggtgagaaaaaaatggaagtgtgagaaatg 87
Query: 468 ctctaaacgttatgccgttcaatctgactggaaagcccattccaagatttgtggcacaag 527
|| || | ||||| || |||||||| |||||||||||||| |||| ||||||||| ||
Sbjct: 86 ttcaaagagatatgctgtgcaatctgattggaaagcccattctaagacttgtggcaccag 27
Query: 528 agagtatagatgtga 542
||| |||||||||||
Sbjct: 26 agaatatagatgtga 12
>KJC_c03168
Length = 846
Score = 115 bits (58), Expect = 1e-25
Identities = 211/262 (80%)
Strand = Plus / Plus
Query: 367 tgtgtacatcatgacccatcaagagctctaggagaccttacaggaatcaaaaaacacttt 426
||||| ||||| || ||||| |||||| |||| || |||||||| || || || || |||
Sbjct: 80 tgtgttcatcacgatccatctagagctttaggcgatcttacagggataaagaagcatttt 139
Query: 427 agcagaaagcatggtgagaagaagtggaagtgtgaaaagtgctctaaacgttatgccgtt 486
|||| || || || |||||||||||||| || || ||||| || || ||||| |||
Sbjct: 140 tgcaggaaacacggcgagaagaagtggaaatgcgataagtgttcgaagaaatatgcagtt 199
Query: 487 caatctgactggaaagcccattccaagatttgtggcacaagagagtatagatgtgattgc 546
|| ||||| |||||||| || ||||| ||||||||||| || || |||| ||| |||||
Sbjct: 200 cagtctgattggaaagctcactccaaaatttgtggcactagggaatataaatgcgattgt 259
Query: 547 ggaacccttttctctaggagagacagtttcatcacacacagagccttctgtgatgcatta 606
||||| ||||| || ||||| || || ||||||||||| |||||||| |||||||| |||
Sbjct: 260 ggaactcttttttcaaggagggatagcttcatcacacatagagccttttgtgatgcttta 319
Query: 607 gcagaagagagtgcaagagcca 628
|| || ||||| || |||||||
Sbjct: 320 gcggaggagagcgccagagcca 341
>KJC_c10306
Length = 589
Score = 87.7 bits (44), Expect = 3e-17
Identities = 122/148 (82%)
Strand = Plus / Minus
Query: 169 ccagaagcagaagtgatagctttgtctccaaaaacactattagcaacaaacagatttata 228
||||| |||||||||||||| | ||||| || ||||| | ||||||||||| || |||
Sbjct: 203 ccagatgcagaagtgatagcactatctcccaagacactgatggcaacaaacaggttcata 144
Query: 229 tgtgagatctgtaacaaaggatttcaaagagatcaaaatcttcaacttcatagaagaggt 288
||||| | || |||||||| ||||||||||| ||||| || || || || ||||||||
Sbjct: 143 tgtgaagtatgcaacaaaggttttcaaagagagcaaaacctacagctccacagaagagga 84
Query: 289 cataacctgccatggaagttaaagcaaa 316
|| ||||| ||||||||| |||||||||
Sbjct: 83 cacaacctcccatggaagctaaagcaaa 56
>KJC_c05837
Length = 885
Score = 63.9 bits (32), Expect = 5e-10
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 135 aaagaagaagagaaatcttccaggcaacccagacccagaagcagaagtgatagctttgtc 194
|||||||||||||||||| || || | ||||| ||||| || |||||||||||||| ||
Sbjct: 877 aaagaagaagagaaatctccctggaatgccagatccagatgctgaagtgatagctttatc 818
Query: 195 tccaaaaacactattagcaacaaa 218
||||| || |||||||| |||||
Sbjct: 817 gccaaagactctattagccacaaa 794
Score = 52.0 bits (26), Expect = 2e-06
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 388 agagctctaggagaccttacaggaatcaaaaaacactttagcagaaagcatggtgagaag 447
|||||||| || ||||| || |||||||| || |||||| |||| ||||| || ||||||
Sbjct: 624 agagctctgggcgacctcac-ggaatcaagaagcacttt-gcaggaagcacggggagaag 567
Query: 448 aagtggaagtgtga 461
||||||||||||||
Sbjct: 566 aagtggaagtgtga 553
>KJC_c04805
Length = 897
Score = 50.1 bits (25), Expect = 7e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 457 tgtgaaaagtgctctaaacgttatgccgttcaatctgactggaaagcccattccaagatt 516
||||| || ||||||||| ||||||| ||||||||||| | ||||| ||| ||||| |
Sbjct: 504 tgtgagaaatgctctaaaggttatgctgttcaatctgattacaaagctcatctcaagact 445
Query: 517 tgtggcacaagag 529
|||||||| ||||
Sbjct: 444 tgtggcactagag 432