Jatropha Genome Database
- JcCA0259301.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0259301.10 + phase: 0 /partial
(1097 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00625 2091 0.0
KJC_s20565 367 e-101
KJC_c00432 357 4e-98
KJC_c09127 297 3e-80
KJC_s19605 149 2e-35
KJC_s13927 72 3e-12
KJC_c03861 72 3e-12
KJC_s19523 56 2e-07
>KJC_c00625
Length = 1832
Score = 2091 bits (1055), Expect = 0.0
Identities = 1083/1097 (98%)
Strand = Plus / Minus
Query: 1 tttgaggcggcatgggctctcacaaatattgcttctggaacatcagagaataccagggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1372 tttgaggcggcatgggctctcacaaatattgcttctggaacatcagagaataccagggtc 1313
Query: 61 gtaattgatcatggggccgtcccaatatttgttaagcttttaagttcgccaactgatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1312 gtaattgatcatggggccgtcccaatatttgttaagcttttaagttcgccaactgatgat 1253
Query: 121 gttagggaacaggctgtttgggcattaggaaatattgctggtgactcaccaaaatgtcgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1252 gttagggaacaggctgtttgggcattaggaaatattgctggtgactcaccaaaatgtcgg 1193
Query: 181 gatcttgtccttggtcatggggccttgatgccattgctcgcacagttcaatgaacatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1192 gatcttgtccttggtcatggggccttgatgccattgctcgcacagttcaatgaacatgca 1133
Query: 241 aagctttctatgttgagaaatgcaacgtggactttatctaacttctgcaggggcaagcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 aagctttctatgttgagaaatgcaacgtggactttatctaacttctgcaggggcaagcca 1073
Query: 301 caacctttatttgagcagacaaagcctgccctcccagctcttgagcgtcttatacattca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 caacctttatttgagcagacaaagcctgccctcccagctcttgagcgtcttatacattca 1013
Query: 361 aacgatgaggaagttttgacagatgcatgctgggcactttcgtatctctcagatggaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 aacgatgaggaagttttgacagatgcatgctgggcactttcgtatctctcagatggaacc 953
Query: 421 aatgacaaaattcaagctgttattgaggcaggggtctgccccaggcttgttgaactttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 aatgacaaaattcaagctgttattgaggcaggggtctgccccaggcttgttgaactttta 893
Query: 481 ctccatccatctccaacagtgctcatacctgctctacgtacaattggaaatattgtcact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 ctccatccatctccaacagtgctcatacctgctctacgtacaattggaaatattgtcact 833
Query: 541 ggtgacgacatgcagactcagtgtataataaaccatcaagctcttccgtgccttttgaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 ggtgacgacatgcagactcagtgtataataaaccatcaagctcttccgtgccttttgaat 773
Query: 601 ctcctgacacataattataagaagagcatcaagaaggaagcatgctggacaatctcaaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 ctcctgacacataattataagaagagcatcaagaaggaagcatgctggacaatctcaaac 713
Query: 661 atcacagctggaaatgtaaatcaaatacaggccataattgatgctggtattatcggtccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 atcacagctggaaatgtaaatcaaatacaggccataattgatgctggtattatcggtccg 653
Query: 721 cttgttcaactgctccagattgctgaatttgagatnnnnnnngaggctgcatgggcaatt 780
||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 652 cttgttcaactgctccagattgctgaatttgagataaaaaaagaggctgcatgggcaatt 593
Query: 781 tcaaatgctacttctggtggctcacatgaacaaatcaagttcttggtgagccaagggtgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tcaaatgctacttctggtggctcacatgaacaaatcaagttcttggtgagccaagggtgt 533
Query: 841 attaagccattgtgtgatctcctgatttgtcctgacccaaggattgtaacagtttgcttg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 attaagccattgtgtgatctcctgatttgtcctgacccaaggattgtaacagtttgcttg 473
Query: 901 gaagggcttgagaacattttaaaggttggtgaagctgnnnnnnntttgggcaacagtgga 960
||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 472 gaagggcttgagaacattttaaaggttggtgaagctgaaaaaaatttgggcaacagtgga 413
Query: 961 gaaacaaatctgtatgcccaattgattgatgacgcagaggggttagaaaagattgaaaac 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gaaacaaatctgtatgcccaattgattgatgacgcagaggggttagaaaagattgaaaac 353
Query: 1021 cttcagagtcatgacaaccatgacatatatgaaaaagcagtgaagattcttgagacttat 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cttcagagtcatgacaaccatgacatatatgaaaaagcagtgaagattcttgagacttat 293
Query: 1081 tggctggaggaggatga 1097
|||||||||||||||||
Sbjct: 292 tggctggaggaggatga 276
>KJC_s20565
Length = 315
Score = 367 bits (185), Expect = e-101
Identities = 199/206 (96%)
Strand = Plus / Plus
Query: 797 gtggctcacatgaacaaatcaagttcttggtgagccaagggtgtattaagccattgtgtg 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggctcacatgaacaaatcaagttcttggtgagccaagggtgtattaagccattgtgtg 60
Query: 857 atctcctgatttgtcctgacccaaggattgtaacagtttgcttggaagggcttgagaaca 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctcctgatttgtcctgacccaaggattgtaacagtttgcttggaagggcttgagaaca 120
Query: 917 ttttaaaggttggtgaagctgnnnnnnntttgggcaacagtggagaaacaaatctgtatg 976
||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 ttttaaaggttggtgaagctgaaaaaaatttgggcaacagtggagaaacaaatctgtatg 180
Query: 977 cccaattgattgatgacgcagagggg 1002
||||||||||||||||||||||||||
Sbjct: 181 cccaattgattgatgacgcagagggg 206
>KJC_c00432
Length = 1885
Score = 357 bits (180), Expect = 4e-98
Identities = 737/925 (79%)
Strand = Plus / Plus
Query: 13 tgggctctcacaaatattgcttctggaacatcagagaataccagggtcgtaattgatcat 72
|||||||||||||| ||||||||||| ||||| |||||||| ||||| |||||||| |||
Sbjct: 530 tgggctctcacaaacattgcttctgggacatctgagaatacaagggtggtaattgaccat 589
Query: 73 ggggccgtcccaatatttgttaagcttttaagttcgccaactgatgatgttagggaacag 132
|| || ||||| |||||||| |||||| | | || |||| ||||||||| | || |||
Sbjct: 590 ggagctgtccccatatttgtaaagcttctcggctctccaagcgatgatgttcgtgagcag 649
Query: 133 gctgtttgggcattaggaaatattgctggtgactcaccaaaatgtcgggatcttgtcctt 192
||||| |||||||| |||||| |||||||||| || || ||||| || ||| | ||||||
Sbjct: 650 gctgtgtgggcattgggaaatgttgctggtgattctcctaaatgccgtgatttagtcctt 709
Query: 193 ggtcatggggccttgatgccattgctcgcacagttcaatgaacatgcaaagctttctatg 252
|| |||| || ||| | ||||| || ||||| || ||||| ||||| || |||||||||
Sbjct: 710 ggcaatggagctttgcttccattactggcacaattgaatgagcatgctaaactttctatg 769
Query: 253 ttgagaaatgcaacgtggactttatctaacttctgcaggggcaagccacaacctttattt 312
| |||||||| |||||||| | || ||||| ||| ||||||||||||| ||| |||
Sbjct: 770 ctaagaaatgcgacgtggacactctcaaacttttgccggggcaagccacagcctcctttt 829
Query: 313 gagcagacaaagcctgccctcccagctcttgagcgtcttatacattcaaacgatgaggaa 372
|| ||| |||||||| || |||||||||| ||| | |||||||| || |||||||||
Sbjct: 830 gaccaggttaagcctgcacttccagctcttgcacgtttaatacattctaatgatgaggaa 889
Query: 373 gttttgacagatgcatgctgggcactttcgtatctctcagatggaaccaatgacaaaatt 432
|| ||||| |||||||| |||||||| || ||||| || ||||| |||||||||||||||
Sbjct: 890 gtcttgactgatgcatgttgggcactctcatatctttctgatggtaccaatgacaaaatt 949
Query: 433 caagctgttattgaggcaggggtctgccccaggcttgttgaacttttactccatccatct 492
|||||||||||||| || || || ||||| |||| || || || ||||| || ||||||
Sbjct: 950 caagctgttattgaagctggagtatgccctcggctagtcgagctgttactacacccatct 1009
Query: 493 ccaacagtgctcatacctgctctacgtacaattggaaatattgtcactggtgacgacatg 552
|| |||| ||||| ||||| || || || ||||||||||||| |||||||| || |||
Sbjct: 1010 ccttcagttctcattcctgcgcttcgcactgttggaaatattgtgactggtgatgatatg 1069
Query: 553 cagactcagtgtataataaaccatcaagctcttccgtgccttttgaatctcctgacacat 612
||||| ||||||||||| ||||||||||| || || |||||| | ||| | |||| |
Sbjct: 1070 cagacccagtgtataatcaaccatcaagcactgccttgccttcttaatttgttgacgaac 1129
Query: 613 aattataagaagagcatcaagaaggaagcatgctggacaatctcaaacatcacagctgga 672
|| ||||| ||||| |||||||||||||| || ||||| || || || || || |||||
Sbjct: 1130 aactataaaaagagtatcaagaaggaagcttgttggactatatctaatataactgctggc 1189
Query: 673 aatgtaaatcaaatacaggccataattgatgctggtattatcggtccgcttgttcaactg 732
|| | || || ||||| | || || ||||||||||| ||||| | || || ||
Sbjct: 1190 aacaaggagcagattcaggctgttatcgaggctggtattattggtccattagtccatcta 1249
Query: 733 ctccagattgctgaatttgagatnnnnnnngaggctgcatgggcaatttcaaatgctact 792
|| || | |||||| ||||| || |||||||| |||||||| || ||||||||
Sbjct: 1250 cttcaaaatgctgagtttgatattaagaaagaggctgcttgggcaatctccaatgctaca 1309
Query: 793 tctggtggctcacatgaacaaatcaagttcttggtgagccaagggtgtattaagccattg 852
|||||||| | |||||||||||||||| | |||| || ||||| ||||| ||||| ||
Sbjct: 1310 tctggtggtactcatgaacaaatcaagtacctggttagtcaaggatgtatcaagccctta 1369
Query: 853 tgtgatctcctgatttgtcctgacccaaggattgtaacagtttgcttggaagggcttgag 912
||||| || || || || ||||| ||||||||||| |||||||| || ||||| |||||
Sbjct: 1370 tgtgaccttctcatctgccctgatccaaggattgtgacagtttgtttagaaggtcttgaa 1429
Query: 913 aacattttaaaggttggtgaagctg 937
|| || || ||||| || |||||||
Sbjct: 1430 aatatcttgaaggtaggagaagctg 1454
>KJC_c09127
Length = 763
Score = 297 bits (150), Expect = 3e-80
Identities = 499/614 (81%), Gaps = 1/614 (0%)
Strand = Plus / Plus
Query: 61 gtaattgatcatggggccgtcccaatatttgttaagcttttaagttcgccaactgatgat 120
|||||||||||||| || || |||||||| || |||||| | || || | |||||||
Sbjct: 2 gtaattgatcatggtgcagttccaatattcgtgaagcttcttgcctcccccagtgatgat 61
Query: 121 gttagggaacaggctgtttgggcattaggaaatattgctggtgactcaccaaaatgtcgg 180
||| |||| |||||||| |||||||| |||||| ||||||||||||| |||||||| ||
Sbjct: 62 gttcgggagcaggctgtctgggcattgggaaatgttgctggtgactccccaaaatgccgt 121
Query: 181 gatcttgtccttggtcatggggccttgatgccattgctcgcacagttcaatgaacatgca 240
|||||||| || | ||||| || || | |||||||| |||||||| ||||| ||||||
Sbjct: 122 gatcttgttctcagccatggagcactgcttccattgctggcacagttgaatgagcatgca 181
Query: 241 aagctttctatgttgagaaatgcaacgtggactttatctaacttctgcaggggcaagcca 300
|| ||||| |||||||| |||||||| ||||| |||| ||||||||||| |||||||||
Sbjct: 182 aaactttcaatgttgaggaatgcaacctggacactatcaaacttctgcagaggcaagcca 241
Query: 301 caacctttatttgagcagacaaagcctgccctcccagctcttgagcgtcttatacattca 360
|||||| | |||| ||| | |||||| | || || |||||||||||| | |||||
Sbjct: 242 caacctcca-ttgaacaggtgaggcctgcaattcccgcacttgagcgtcttgtgcattct 300
Query: 361 aacgatgaggaagttttgacagatgcatgctgggcactttcgtatctctcagatggaacc 420
||||| |||||| | || ||||| |||||||||||||| ||||| || ||||| ||
Sbjct: 301 gctgatgaagaagttctaactgatgcctgctgggcactttcctatctttctgatggtaca 360
Query: 421 aatgacaaaattcaagctgttattgaggcaggggtctgccccaggcttgttgaactttta 480
||||||||||| |||||||| ||||||||||| ||||| || |||||||||| || |
Sbjct: 361 aatgacaaaatccaagctgtgattgaggcaggtgtctgtcctcggcttgttgagctcctt 420
Query: 481 ctccatccatctccaacagtgctcatacctgctctacgtacaattggaaatattgtcact 540
|||||||||||||| ||||||| | ||||| || || ||| ||||||||||||| ||
Sbjct: 421 ctccatccatctccttcagtgcttgttcctgcccttcgcacagttggaaatattgtgaca 480
Query: 541 ggtgacgacatgcagactcagtgtataataaaccatcaagctcttccgtgccttttgaat 600
|| |||||||| |||||||||||| |||||| | || || ||||| | |||| | | |
Sbjct: 481 ggggacgacatacagactcagtgtgtaataagctatggtgcacttccataccttctaagt 540
Query: 601 ctcctgacacataattataagaagagcatcaagaaggaagcatgctggacaatctcaaac 660
|| |||| |||||| |||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 541 ctattgacccataatcataaaaagagcattaagaaagaagcttgctggaccatctcaaac 600
Query: 661 atcacagctggaaa 674
|| |||||||||||
Sbjct: 601 attacagctggaaa 614
>KJC_s19605
Length = 273
Score = 149 bits (75), Expect = 2e-35
Identities = 215/259 (83%), Gaps = 2/259 (0%)
Strand = Plus / Plus
Query: 322 aagcctgccctcccagctcttgagcgtcttatacattcaaacgatgaggaagttttgaca 381
|||||||| || |||||||||| ||| | |||||||| || ||||||||||| |||||
Sbjct: 4 aagcctgcacttccagctcttgcacgtttaatacattctaatgatgaggaagtcttgact 63
Query: 382 gatgcatgctgggcactttcgtatctctcagatggaaccaatgacaaaattcaagctgtt 441
|||||||| |||||||| || ||||| || ||||| ||||||||||||||||||||||||
Sbjct: 64 gatgcatgttgggcactctcatatctttctgatggtaccaatgacaaaattcaagctgtt 123
Query: 442 attgaggcaggggtctgccccaggcttgttgaacttttactccatccatctccaacagtg 501
||||| || || || ||||| |||| || || || ||||| || |||||||| ||||
Sbjct: 124 attgaagctggagtatgccctcggctagtcgagctgttactacacccatctccttcagtt 183
Query: 502 ctca-tacctgctc-tacgtacaattggaaatattgtcactggtgacgacatgcagactc 559
|||| | ||||| | | || || ||||||||||||| |||||||| || |||||||| |
Sbjct: 184 ctcattccctgcgctttcgcactgttggaaatattgtgactggtgatgatatgcagaccc 243
Query: 560 agtgtataataaaccatca 578
|||||||||| ||||||||
Sbjct: 244 agtgtataatcaaccatca 262
>KJC_s13927
Length = 491
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 13 tgggctctcacaaatattgcttctggaacatcagagaataccagggtcgtaattga 68
|||||||||||||| ||||||||||| ||||| |||||||| ||||| ||||||||
Sbjct: 118 tgggctctcacaaacattgcttctgggacatctgagaatacaagggtggtaattga 63
>KJC_c03861
Length = 789
Score = 71.9 bits (36), Expect = 3e-12
Identities = 150/188 (79%)
Strand = Plus / Minus
Query: 114 tgatgatgttagggaacaggctgtttgggcattaggaaatattgctggtgactcaccaaa 173
||||||||| || || ||||| || ||||| || || ||| |||| ||||| || ||||
Sbjct: 532 tgatgatgtcagagagcaggcggtgtgggctttgggcaatgttgcaggtgattctccaag 473
Query: 174 atgtcgggatcttgtccttggtcatggggccttgatgccattgctcgcacagttcaatga 233
|| |||||||||| |||||| |||| || ||||| ||||| || || ||||| |||||
Sbjct: 472 ttgcagggatcttgttcttggttatggtgctttgatcccattactggctcagttaaatga 413
Query: 234 acatgcaaagctttctatgttgagaaatgcaacgtggactttatctaacttctgcagggg 293
| | ||||||| || ||| || | ||||| || ||||||||||| ||||||||| | ||
Sbjct: 412 aaagtcaaagctatcaatgctgcggaatgctacctggactttatccaacttctgccgtgg 353
Query: 294 caagccac 301
||||||||
Sbjct: 352 caagccac 345
>KJC_s19523
Length = 414
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 631 aagaaggaagcatgctggacaatctcaaacatcacagctggaaa 674
||||| ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 1 aagaaagaagcttgctggaccatctcaaacattacagctggaaa 44