Jatropha Genome Database
- JcCA0258981.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0258981.10 + phase: 0 /partial
(951 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01777 1104 0.0
KJC_c00213 182 1e-45
KJC_c07721 54 6e-07
>KJC_c01777
Length = 1112
Score = 1104 bits (557), Expect = 0.0
Identities = 569/573 (99%)
Strand = Plus / Minus
Query: 379 gggactgaaagtaggtatttgtataaagaaggtgatgatttgccggaaaaggttgattgg 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1112 gggactgaaagtaggtatttgtataaagaaggtgatgatttgccggaaaaggttgattgg 1053
Query: 439 agagaaaaaggggctgttgttcctgtcaagaatcaaggacagtgtgggagttgctgggct 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 agagaaaaaggggctgttgttcctgtcaagaatcaaggacagtgtgggagttgctgggct 993
Query: 499 ttctcaactgttgctgcagtagaagggattaaccagattgtaactggtgatctaatctct 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 ttctcaactgttgctgcagtagaagggattaaccagattgtaactggtgatctaatctct 933
Query: 559 ctatcagagcaggagttggtagattgtgatagatcatataaccagggatgcaatggaggt 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 ctatcagagcaggagttggtagattgtgatagatcatataaccagggatgcaatggaggt 873
Query: 619 cttatggactatgcctttgaatttattatccaaaatggtggtattgatactgaacaagat 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 cttatggactatgcctttgaatttattatccaaaatggtggtattgatactgaacaagat 813
Query: 679 tacccatatgaggctgttgataatgtttgtgatccatacaggaaaaatgctaaggtagtt 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 tacccatatgaggctgttgataatgtttgtgatccatacaggaaaaatgctaaggtagtt 753
Query: 739 actattgatggatatgaagatgttcctgaaaatgatgagaaatccttgaagaaggctctg 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 752 actattgatggatatgaagatgttcctgaaaatgatgagaaatccttgaagaaggctgtg 693
Query: 799 gcaaatcagccagttagtgttgccattgaagctggtggcagggctttccaacttttccaa 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 692 gcaaatcagccagttagtgttgccattgaagctggtggcagggctttccaactttaccaa 633
Query: 859 tcgggtgtttttactggtagatgtggcacacagcttgaccatggtgtggctgctgttgga 918
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 632 tcgggtgtttttactggtagatgtggtacacagcttgaccatggtgtggctgctgttgga 573
Query: 919 tacggcacagagaatggtgtagattactggttg 951
|| ||||||||||||||||||||||||||||||
Sbjct: 572 tatggcacagagaatggtgtagattactggttg 540
>KJC_c00213
Length = 1775
Score = 182 bits (92), Expect = 1e-45
Identities = 173/200 (86%)
Strand = Plus / Minus
Query: 484 gggagttgctgggctttctcaactgttgctgcagtagaagggattaaccagattgtaact 543
|||||||||||||| |||||||| || |||| || |||||||| ||| ||||||| ||
Sbjct: 1242 gggagttgctgggcattctcaacaatttctgctgtggaagggatcaacaagattgtcacc 1183
Query: 544 ggtgatctaatctctctatcagagcaggagttggtagattgtgatagatcatataaccag 603
|| || || ||||||||||| |||||||||||||| |||||||||| || ||||| ||
Sbjct: 1182 ggcgacctgatctctctatctgagcaggagttggtggattgtgatacctcttataatcaa 1123
Query: 604 ggatgcaatggaggtcttatggactatgcctttgaatttattatccaaaatggtggtatt 663
||||||||||||||||| |||||||||| |||| ||||||||||| | |||||||| |||
Sbjct: 1122 ggatgcaatggaggtctgatggactatggctttcaatttattatcaacaatggtggcatt 1063
Query: 664 gatactgaacaagattaccc 683
||||||||| ||||||||||
Sbjct: 1062 gatactgaagaagattaccc 1043
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 212 ggtttcagatctttaaagataatcttaaattcatcgatgagcataactcgg 262
|||||||||| || ||||||||||| | || |||||||||||||||||||
Sbjct: 1508 ggtttcagattttcaaagataatctaaggtttatcgatgagcataactcgg 1458
>KJC_c07721
Length = 760
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 775 gagaaatccttgaagaaggctctggcaaatcagccagttagtgttgccattgaagctggt 834
|||||||| ||| |||| ||| | |||||||| || || ||||||||||||||||| ||
Sbjct: 188 gagaaatcgttgcagaaagctgtagcaaatcaacctgtcagtgttgccattgaagccagt 247
Query: 835 ggcagggcttt 845
|||| ||||||
Sbjct: 248 ggcatggcttt 258