Jatropha Genome Database
- JcCA0258491.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0258491.10 - phase: 0 /partial
(657 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02274 1213 0.0
KJC_c02335 224 2e-58
>KJC_c02274
Length = 733
Score = 1213 bits (612), Expect = 0.0
Identities = 649/660 (98%), Gaps = 3/660 (0%)
Strand = Plus / Minus
Query: 1 atgaatggaaatgtgatctcctgtgaaggtcatttgaactcgaccaatgattcttctaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 atgaatggaaatgtgatctcctgtgaaggtcatttgaactcgaccaatgattcttctaat 634
Query: 61 tcagatcccatgagtccttctgatcggcctgttcgtgtctatgctgacgggatctacgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tcagatcccatgagtccttctgatcggcctgttcgtgtctatgctgacgggatctacgat 574
Query: 121 ctcttccacttcggccacgctcgctccctcgaacaagccaaaaaatcgttcccaaacact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ctcttccacttcggccacgctcgctccctcgaacaagccaaaaaatcgttcccaaacact 514
Query: 181 tatttgctggttggatgttgcaacgatgaaatcacccacaagt-acaagggaaaaactgt 239
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 513 tatttgctggttggatgttgcaacgatgaaatcacccacaagtaacaagggaaaaactgt 454
Query: 240 tatgacagaatctgagcgatatgaatctcttcatcattgcaagtgggttgatgaagtcat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tatgacagaatctgagcgatatgaatctcttcatcattgcaagtgggttgatgaagtcat 394
Query: 300 tactgatgctccttgggtgatcacacaagaatttcttgacaagcacaatattgattatgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tactgatgctccttgggtgatcacacaagaatttcttgacaagcacaatattgattatgt 334
Query: 360 agctcatgattcactcccctatgctgatgctagtggagctggaaaagatgtttatg-aat 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 333 agctcatgattcactcccctatgctgatgctagtggagctggaaaagatgtttatgtaat 274
Query: 419 ttgt-gaaaaaagttggaagatttaaggaaacaaaaagaactgatggaatttctacatca 477
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ttgtagaaaaaagttggaagatttaaggaaacaaaaagaactgatggaatttctacatca 214
Query: 478 gacattatcatgagaatcgttaaagactataaccagtatgtgatgcgcaacttggatcga 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gacattatcatgagaatcgttaaagactataaccagtatgtgatgcgcaacttggatcga 154
Query: 538 ggatacacgagaaaagagcttggcgttagctttgtgaaggaaaagcgcctgagagtgaat 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ggatacacgagaaaagagcttggcgttagctttgtgaaggaaaagcgcctgagagtgaat 94
Query: 598 atgcggttnnnnnnnntacaagagaaagtaaaggaacaacaagaaaaagttggagaaaag 657
|||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 atgcggttaaaaaaaatacaagagaaagtaaaggaacaacaagaaaaagttggagaaaag 34
>KJC_c02335
Length = 830
Score = 224 bits (113), Expect = 2e-58
Identities = 401/497 (80%)
Strand = Plus / Plus
Query: 88 cctgttcgtgtctatgctgacgggatctacgatctcttccacttcggccacgctcgctcc 147
||||||||||| || || ||||| ||||| |||||||||||||| || ||||| || ||
Sbjct: 72 cctgttcgtgtatacgcagacggcatctatgatctcttccactttggtcacgcccgttct 131
Query: 148 ctcgaacaagccaaaaaatcgttcccaaacacttatttgctggttggatgttgcaacgat 207
||||| ||||| || || ||| ||||| ||||| | | |||||||| ||||| |||
Sbjct: 132 ctcgagcaagcgaagaagctgtttccaaatacttacctattagttggatgctgcaatgat 191
Query: 208 gaaatcacccacaagtacaagggaaaaactgttatgacagaatctgagcgatatgaatct 267
|||||||||| |||||| |||||||||||||| ||||| || || ||||| || |||
Sbjct: 192 gaaatcacccgcaagtataagggaaaaactgtcatgactgaccaggaacgatacgagtct 251
Query: 268 cttcatcattgcaagtgggttgatgaagtcattactgatgctccttgggtgatcacacaa 327
|||| ||||||| ||||||||||||||| || |||||||||| |||||| | |||| |
Sbjct: 252 cttcgccattgcaggtgggttgatgaagtgatccctgatgctccatgggtgcttacacca 311
Query: 328 gaatttcttgacaagcacaatattgattatgtagctcatgattcactcccctatgctgat 387
|| || ||||||||||| | || || || || || |||||||| || || |||||||||
Sbjct: 312 gagttccttgacaagcatcaaatagactacgtggcccatgattctcttccttatgctgat 371
Query: 388 gctagtggagctggaaaagatgtttatgaatttgtgaaaaaagttggaagatttaaggaa 447
|| | ||| |||||||||||||| |||||||||||||| |||||| ||||||||||
Sbjct: 372 gcaactggggctggaaaagatgtctatgaatttgtgaaggctattggaaaatttaaggaa 431
Query: 448 acaaaaagaactgatggaatttctacatcagacattatcatgagaatcgttaaagactat 507
|||||| |||||||||| || || || ||||| ||||| ||||| || || ||||||||
Sbjct: 432 acaaaacgaactgatgggatctcaacttcagatattataatgaggattgtcaaagactac 491
Query: 508 aaccagtatgtgatgcgcaacttggatcgaggatacacgagaaaagagcttggcgttagc 567
|| | ||||| |||||||| |||| || || || | ||||| || || |||||||||
Sbjct: 492 aatgaatatgttatgcgcaatttggcacgtgggtattcaagaaaggaactgggcgttagc 551
Query: 568 tttgtgaaggaaaagcg 584
| |||||||||||||||
Sbjct: 552 tatgtgaaggaaaagcg 568