Jatropha Genome Database
- JcCA0257171.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0257171.10 + phase: 0
(1557 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05223 1162 0.0
KJC_c06593 987 0.0
KJC_c06953 82 5e-15
>KJC_c05223
Length = 680
Score = 1162 bits (586), Expect = 0.0
Identities = 640/654 (97%), Gaps = 3/654 (0%)
Strand = Plus / Minus
Query: 905 cgttaacccaactgcaacaactcagtgtcggctgtgtgtctgaagataattccacccaac 964
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 680 cgttaacccaactgcaacaactcagtgttggctgtgtgtctgaagataattccacccaac 621
Query: 965 tatttgcagccatcacgaagatggaaaatcttgtctccttgtcactcaaagcagatgaat 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tatttgcagccatcacgaagatggaaaatcttgtctccttgtcactcaaagcagatgaat 561
Query: 1025 tctactcccttaattcatctgttctagatttggaatcattttcccctccatcttctatta 1084
||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gggactcctttcatttatctgttctagatttggaatcattttcccctccatcttctatta 501
Query: 1085 aacatctgaggttatatggtgcccttgttgaaatgcctgcttggcttgcctccatggaaa 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aacatctgaggttatatggtgcccttgttgaaatgcctgcttggcttgcctccatggaaa 441
Query: 1145 acctcactgtgttacatttaagttattccaatctgttagagcccccagcccctacacttc 1204
||||||||||||||||||||| | |||||||||| |||||||||||||||| ||||||||
Sbjct: 440 acctcactgtgttacatttaattaattccaatctattagagcccccagccc-tacacttc 382
Query: 1205 aatttctccccaaattaaaggttcttcgtctaggtcgtgcttataaagtacgctgcatcg 1264
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatttctccc-aaattaaaggttcttcgtctaggtcgtgcttataaagtacgctgcatcg 323
Query: 1265 gtaaagagttctgtgacgccggtgggtttccaaagcttgaaatacttactttccatggtg 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtaaagagttctgtgacgccggtgggtttccaaagcttgaaatacttactttccatggtg 263
Query: 1325 tggatatcctagtggagtggacggagataggccgtggagcttttcctagtttaaggtatc 1384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tggatatcctagtggagtggacggagataggccgtggagcttttcctagtttaaggtatc 203
Query: 1385 ttgaattttggcgttgtaaaaacttgaggtttcttccagaaggcttacagaatatttcta 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttgaattttggcgttgtaaaaacttgaggtttcttccagaaggcttacagaatatttcta 143
Query: 1445 gtcttcaggtgttgaaattgtgtcatacacatctcgaccttacaaggcgattactgggtg 1504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gtcttcaggtgttgaaattgtgtcatacacatctcgaccttacaaggcgattactgggtg 83
Query: 1505 aagagagttacaagatcaagcatatttc-aaaagtcagcttcatcggttgctga 1557
|||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 82 aagagagtcacaagatcaagcatatttcaaaaagtcagcttcatcggttgctga 29
>KJC_c06593
Length = 505
Score = 987 bits (498), Expect = 0.0
Identities = 505/506 (99%), Gaps = 1/506 (0%)
Strand = Plus / Plus
Query: 448 cgcaacaatattcctcctgatttcaaaacccttcaaattcgttctctatttttggattca 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgcaacaatattcctcctgatttcaaaacccttcaaattcgttctctatttttggattca 60
Query: 508 gtcggattttctcgggcctctatggaaactatttgcaagttgcaatatttattggtgtta 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcggattttctcgggcctctatggaaactatttgcaagttgcaatatttattggtgtta 120
Query: 568 catttggatggccgccttttggagagattacctgacgaagtgggtgacttgtttcacctg 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catttggatggccgccttttggagagattacctgacgaagtgggtgacttgtttcacctg 180
Query: 628 agatatttggggctgagttctttagatatggatgaacttccacagacattaggcaacctt 687
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agatatttggggctgagt-ctttagatatggatgaacttccacagacattaggcaacctt 239
Query: 688 caaaacctacaaactttggatataatcacccatagaaaactgaaggaattgcctttacaa 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 caaaacctacaaactttggatataatcacccatagaaaactgaaggaattgcctttacaa 299
Query: 748 gtctttaatattcaacagttgagacacatcaatatcataacaggccacccgagcacttca 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtctttaatattcaacagttgagacacatcaatatcataacaggccacccgagcacttca 359
Query: 808 agtggaattagagttccaagtggaattggaacattgaaaagtcttcttactttaggtgaa 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agtggaattagagttccaagtggaattggaacattgaaaagtcttcttactttaggtgaa 419
Query: 868 gtatatgctggaggcgtcattgccagtgaactaagctcgttaacccaactgcaacaactc 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gtatatgctggaggcgtcattgccagtgaactaagctcgttaacccaactgcaacaactc 479
Query: 928 agtgtcggctgtgtgtctgaagataa 953
||||||||||||||||||||||||||
Sbjct: 480 agtgtcggctgtgtgtctgaagataa 505
>KJC_c06953
Length = 487
Score = 81.8 bits (41), Expect = 5e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 374 ttgtcgaggtggatgaagtggaatttttggctgaagctgcgaatttacctgtacgagcta 433
|||| |||||||||||||||||||||||| || ||||||||||||||||||| || ||||
Sbjct: 183 ttgttgaggtggatgaagtggaatttttg-ctaaagctgcgaatttacctgttcgggcta 125
Query: 434 taata 438
|||||
Sbjct: 124 taata 120
Score = 81.8 bits (41), Expect = 5e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 84 ttcagctgatttcgtttcaatatatcgaagtcttcctcattatctcatgtcctgcttaga 143
|||| |||||| | |||||||||||| |||||||||| |||||||| ||||||| |||||
Sbjct: 487 ttcaactgattgcatttcaatatatcaaagtcttcctgattatctcgtgtcctgtttaga 428
Query: 144 ctattgggctatc 156
|||||| ||||||
Sbjct: 427 ctattgtgctatc 415