Jatropha Genome Database
- JcCA0251901.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0251901.10 + phase: 0
(1164 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00150 105 2e-22
KJC_c12763 88 6e-17
>KJC_c00150
Length = 1583
Score = 105 bits (53), Expect = 2e-22
Identities = 170/209 (81%)
Strand = Plus / Plus
Query: 799 aatgcttttcttgtgacaatcacatatttgcagcacactcaccctgcattgccacactat 858
||||| |||||||| | ||||||||| |||| || ||||| ||| ||||||| || |||
Sbjct: 1004 aatgcatttcttgttatgatcacatatctgcaacatactcatccttcattgccgcattat 1063
Query: 859 gactcgtccgaatgggattggctccggggagctttgtcgacagtggatagagattatggg 918
|| || || || ||||||||||| | || || | | || || ||||||||||| ||
Sbjct: 1064 gattcttctgagtgggattggctgagaggcgcgctcgcaactgttgatagagattacgga 1123
Query: 919 gtgttgaataaggttttccataatattacagacactcatgtaacccaccatctcttctct 978
| ||||| ||||| |||||||| |||||||||||||||||| | |||||| | || |||
Sbjct: 1124 atcttgaacaaggtattccataacattacagacactcatgtagctcaccatttgttttct 1183
Query: 979 acaatgcctcattatcatgcaatggaggc 1007
|||||||| ||||||||||||||||||||
Sbjct: 1184 acaatgccacattatcatgcaatggaggc 1212
Score = 103 bits (52), Expect = 9e-22
Identities = 154/188 (81%)
Strand = Plus / Plus
Query: 301 ctcactggtgtttgggtcattgctcatgaatgcggccaccatgcttttagtgactatcaa 360
|||||||| ||||||| || || ||||| || || || ||||| |||||||||||||||
Sbjct: 506 ctcactggcatttgggttatagcacatgagtgtgggcatcatgcctttagtgactatcaa 565
Query: 361 tgggttgatgacactgttggcctaattctccactcttcacttcttgttccttatttttca 420
||| ||||||||| |||||||| | ||||| || | || ||||| ||||| ||||||
Sbjct: 566 tggcttgatgacatagttggccttctcctccattcctgtctccttgtcccttacttttca 625
Query: 421 tggaaaattagccatcgtcgccatcactccaacaccggttccattgaacgtgatgaggtc 480
|||||| |||||| || || |||||||| |||||||||||| |||| || ||||| ||
Sbjct: 626 tggaaacatagccaccgccgtcatcactctaacaccggttcccttgagcgagatgaagta 685
Query: 481 tttgtccc 488
||||||||
Sbjct: 686 tttgtccc 693
>KJC_c12763
Length = 660
Score = 87.7 bits (44), Expect = 6e-17
Identities = 153/188 (81%), Gaps = 1/188 (0%)
Strand = Plus / Minus
Query: 301 ctcactggtgtttgggtcattgctcatgaatgcggccaccatgcttttagtgactatcaa 360
|||||||| ||||||| || || ||||| || || || ||||| |||||||||||||||
Sbjct: 188 ctcactggcatttgggttatagcacatgagtgtgggcatcatgcctttagtgactatcaa 129
Query: 361 tgggttgatgacactgttggcctaattctccactcttcacttcttgttccttatttttca 420
||| ||||||||| |||||||| | ||||| || | || ||||| ||||| |||||
Sbjct: 128 tggcttgatgacatagttggccttctcctccattcctgtctccttgtccctta-ctttca 70
Query: 421 tggaaaattagccatcgtcgccatcactccaacaccggttccattgaacgtgatgaggtc 480
|||||| |||||| || || |||||||| |||||||||||| |||| || ||||| ||
Sbjct: 69 tggaaacatagccaccgccgtcatcactctaacaccggttcccttgagcgagatgaagta 10
Query: 481 tttgtccc 488
||||||||
Sbjct: 9 tttgtccc 2
Score = 61.9 bits (31), Expect = 3e-09
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 301 ctcactggtgtttgggtcattgctcatgaatgcggccaccatgcttttagtgactatcaa 360
|||||||| ||||||| || || ||||| || || || ||||| |||||||||||||||
Sbjct: 312 ctcactggcatttgggttatagcacatgagtgtgggcatcatgcctttagtgactatcaa 253
Query: 361 tgggttgatgacactgttggcct 383
||| ||||||||| ||||||||
Sbjct: 252 tggcttgatgacatagttggcct 230