Jatropha Genome Database

JcCA0249621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0249621.10 - phase: 0 /pseudo
         (1119 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10693                                                            533   e-151

>KJC_c10693 
          Length = 386

 Score =  533 bits (269), Expect = e-151
 Identities = 283/285 (99%), Gaps = 2/285 (0%)
 Strand = Plus / Minus

                                                                        
Query: 835  gcccttaatgaagaccaaatgacagaactggcttgtggtttgaaaagcagcaagaaaggc 894
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 386  gcccttaatgaagaccaaatgacagaactggcttgtggtttgaaa-gcagcaagaaaggc 328

                                                                        
Query: 895  ttcttatgggtagtaagagaatcagaagacaaaaaacttccagacaatttcatagaggag 954
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327  ttcttatgggtagtaagagaatcagaagacaaaaaacttccagacaatttcatagaggag 268

                                                                        
Query: 955  acaaaaagacatgggtttagttgtaaaatggagtcctcaattagatgttttggctcataa 1014
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267  acaaaa-gacatgggtttagttgtaaaatggagtcctcaattagatgttttggctcataa 209

                                                                        
Query: 1015 atcagtaggctgctttataactcactgcggttggaattcaacgctggaggcattgagctt 1074
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208  atcagtaggctgctttataactcactgcggttggaattcaacgctggaggcattgagctt 149

                                                         
Query: 1075 aggagtgccaatggtggcaatgccacagtggacggatcaaccaac 1119
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148  aggagtgccaatggtggcaatgccacagtggacggatcaaccaac 104