Jatropha Genome Database
- JcCA0249291.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0249291.10 - phase: 2 /pseudo/partial
(825 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02030 511 e-145
KJC_c06231 490 e-138
KJC_c01682 96 2e-19
KJC_c00976 90 1e-17
KJC_c12964 60 9e-09
KJC_c03564 56 1e-07
>KJC_c02030
Length = 1305
Score = 511 bits (258), Expect = e-145
Identities = 258/258 (100%)
Strand = Plus / Minus
Query: 208 gtctgagacatctgaatttgccagaaaatgggttcctttctgtaagaaatttaatataga 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gtctgagacatctgaatttgccagaaaatgggttcctttctgtaagaaatttaatataga 199
Query: 268 gccccgagcccctgaatggtatttctctcagaaggttgactatctaaagaataaagtcca 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gccccgagcccctgaatggtatttctctcagaaggttgactatctaaagaataaagtcca 139
Query: 328 cccatcatttgtgagggaaaggcgtgctatgaagagagaatatgaagaattcaaagttag 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 cccatcatttgtgagggaaaggcgtgctatgaagagagaatatgaagaattcaaagttag 79
Query: 388 aataaatggattggttgccactgcacaaaaagtaccagaagatggctggacaatgcagga 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 aataaatggattggttgccactgcacaaaaagtaccagaagatggctggacaatgcagga 19
Query: 448 tggaactccatggcccgg 465
||||||||||||||||||
Sbjct: 18 tggaactccatggcccgg 1
Score = 210 bits (106), Expect = 4e-54
Identities = 113/114 (99%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 20 atggaagactggaa-gaaaaggcagaatgacaaacttcaggtggtcaagcatgaaggggg 78
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 atggaagactggaaagaaaaggcagaatgacaaacttcaggtggtcaagcatgaaggggg 772
Query: 79 aaatgatggtggaaactttgatggggatgaatttgatgatcctgatttgcccat 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 aaatgatggtggaaactttgatggggatgaatttgatgatcctgatttgcccat 718
Score = 151 bits (76), Expect = 3e-36
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 133 tatcatggattctcgatcagtttccaaaatggtatccaattgaacgtgagacataccttg 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tatcatggattctcgatcagtttccaaaatggtatccaattgaacgtgagacataccttg 467
Query: 193 atcggctctcacttag 208
||||||||||||||||
Sbjct: 466 atcggctctcacttag 451
>KJC_c06231
Length = 457
Score = 490 bits (247), Expect = e-138
Identities = 260/263 (98%), Gaps = 1/263 (0%)
Strand = Plus / Plus
Query: 563 gtctctcgtgagaagagaccagggtttgaacaccataaaaaggctggggccatgaattct 622
|||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 1 gtctctcgtgagaagagaccagggtttgaacaccataaaacgggtggggcc-tgaattct 59
Query: 623 ctggttcgggtctctgctgttctatcaaatgctccttatcttttgaatgtggactgtgat 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 ctggttcgggtctctgctgttctatcaaatgctccttatcttttgaatgtggactgtgat 119
Query: 683 cactatattaacaacagcaaagctcttagagaagctatgtgtttcatgatggatccaaca 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 cactatattaacaacagcaaagctcttagagaagctatgtgtttcatgatggatccaaca 179
Query: 743 tcagggaagaaagtttgctatgtccagtttcctcaaagatttgatggtattgatcgtcat 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tcagggaagaaagtttgctatgtccagtttcctcaaagatttgatggtattgatcgtcat 239
Query: 803 gacagatactcaaatcggaatgt 825
|||||||||||||||||||||||
Sbjct: 240 gacagatactcaaatcggaatgt 262
>KJC_c01682
Length = 1341
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 659 tatcttttgaatgtggactgtgatcactatattaacaacagcaaagctcttagagaagct 718
||||||||||||||||| ||||||||||| | || |||||||||||||||| ||||||
Sbjct: 996 tatcttttgaatgtggattgtgatcactacttcaataacagcaaagctcttaaagaagca 937
Query: 719 atgtgtttcatgatggatcc 738
||||| ||||||||||||||
Sbjct: 936 atgtgcttcatgatggatcc 917
>KJC_c00976
Length = 1696
Score = 89.7 bits (45), Expect = 1e-17
Identities = 104/121 (85%), Gaps = 2/121 (1%)
Strand = Plus / Minus
Query: 677 tgtgatcactatattaacaacagcaaagctcttagagaagctatgtgtttcatgatggat 736
||||||||||| || ||||||||||||||| | || ||||||||||||||||||||||||
Sbjct: 1156 tgtgatcactacataaacaacagcaaagctttgagggaagctatgtgtttcatgatggat 1097
Query: 737 ccaacatcagggaaga-aagtttgctatgtccagtttcctcaaagatttgatggtattga 795
|| | ||| |||| | | || || ||||| |||||||| || |||||||||||||||||
Sbjct: 1096 ccca-atcttggaaaacatgtctgttatgttcagtttccccagagatttgatggtattga 1038
Query: 796 t 796
|
Sbjct: 1037 t 1037
Score = 73.8 bits (37), Expect = 6e-13
Identities = 142/177 (80%)
Strand = Plus / Minus
Query: 208 gtctgagacatctgaatttgccagaaaatgggttcctttctgtaagaaatttaatataga 267
||||||||| || || ||||| || |||||||| |||||||| ||||||| ||| || ||
Sbjct: 1625 gtctgagacttcagagtttgcaaggaaatgggtacctttctgcaagaaatataacattga 1566
Query: 268 gccccgagcccctgaatggtatttctctcagaaggttgactatctaaagaataaagtcca 327
||| || || || |||||||| || |||||||| ||||||| | || | ||||| ||
Sbjct: 1565 gccacgggctccagaatggtactttgctcagaagattgactacttgaaagacaaagttca 1506
Query: 328 cccatcatttgtgagggaaaggcgtgctatgaagagagaatatgaagaattcaaagt 384
|||||||||| | ||| | | |||||||||||||||||||||||||| |||||
Sbjct: 1505 aacatcatttgtaaaggatcgtagagctatgaagagagaatatgaagaatttaaagt 1449
>KJC_c12964
Length = 624
Score = 60.0 bits (30), Expect = 9e-09
Identities = 86/102 (84%), Gaps = 2/102 (1%)
Strand = Plus / Minus
Query: 692 aacaacagcaaagctcttagagaagctatgtgtttcatgatggatccaacatcagggaag 751
||||||||||| || | |||||||||||||||||| | |||||||| | ||| || ||
Sbjct: 594 aacaacagcaaggcattgagagaagctatgtgtttcctaatggatccta-atcttgggag 536
Query: 752 aa-agtttgctatgtccagtttcctcaaagatttgatggtat 792
| |||||| |||||||||||||| || ||||||||||||||
Sbjct: 535 atcagtttgttatgtccagtttccccagagatttgatggtat 494
>KJC_c03564
Length = 947
Score = 56.0 bits (28), Expect = 1e-07
Identities = 73/88 (82%)
Strand = Plus / Minus
Query: 708 ttagagaagctatgtgtttcatgatggatccaacatcagggaagaaagtttgctatgtcc 767
|||||||||| |||||||||||||||||||| || |||| ||| ||||||||||
Sbjct: 915 ttagagaagcaatgtgtttcatgatggatcctttgcttggaaagagagtgtgctatgtcc 856
Query: 768 agtttcctcaaagatttgatggtattga 795
|||| || ||||| |||||||| |||||
Sbjct: 855 agttcccacaaaggtttgatggcattga 828