Jatropha Genome Database

JcCA0247191.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0247191.10 + phase: 1 /partial
         (410 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01532                                                            702   0.0  

>KJC_c01532 
          Length = 1428

 Score =  702 bits (354), Expect = 0.0
 Identities = 354/354 (100%)
 Strand = Plus / Minus

                                                                        
Query: 57   gtgaagctagtttggtactataacaatgctcttggaagaccaaataagaagaaatttata 116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 gtgaagctagtttggtactataacaatgctcttggaagaccaaataagaagaaatttata 963

                                                                        
Query: 117  gcccgtgcaaaatcttaccatggttcaactttgatatcagccagtctttctggacttcca 176
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962  gcccgtgcaaaatcttaccatggttcaactttgatatcagccagtctttctggacttcca 903

                                                                        
Query: 177  gcattgcaccaaaagtttgatcttcccgctccatttgtcttgcacactgactgccctcat 236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902  gcattgcaccaaaagtttgatcttcccgctccatttgtcttgcacactgactgccctcat 843

                                                                        
Query: 237  tactggcgttatcatcttccaggtgagacagaggaagaattctcaagcagattagctaag 296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842  tactggcgttatcatcttccaggtgagacagaggaagaattctcaagcagattagctaag 783

                                                                        
Query: 297  aatttggaggatctcatcctgaaagagggaccagagacgattgctgcatttattgcggag 356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782  aatttggaggatctcatcctgaaagagggaccagagacgattgctgcatttattgcggag 723

                                                                  
Query: 357  cctgtcatgggggcaggaggtgtgatacctccacctgcatcttatttcgaaaag 410
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722  cctgtcatgggggcaggaggtgtgatacctccacctgcatcttatttcgaaaag 669