Jatropha Genome Database
- JcCA0241461.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0241461.10 + phase: 0 /partial
(827 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00746 1628 0.0
>KJC_c00746
Length = 1833
Score = 1628 bits (821), Expect = 0.0
Identities = 821/821 (100%)
Strand = Plus / Minus
Query: 1 atggaagaccagcaagacgccacagctctcaagcaccccttctcggaccgcgtccctatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1778 atggaagaccagcaagacgccacagctctcaagcaccccttctcggaccgcgtccctatc 1719
Query: 61 cgatccattgtcaatcggcccgacggaggaactggcctctgtgggcaacgcgtgcgaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1718 cgatccattgtcaatcggcccgacggaggaactggcctctgtgggcaacgcgtgcgaatt 1659
Query: 121 ggcggctgggtgaagaccggaagagagcagggcaaaggatccttcgcctttttggagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1658 ggcggctgggtgaagaccggaagagagcagggcaaaggatccttcgcctttttggagttg 1599
Query: 181 aacgacggctcgtgttctgccaatctccaggttattgtggagaaggaagtggcggatctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1598 aacgacggctcgtgttctgccaatctccaggttattgtggagaaggaagtggcggatctg 1539
Query: 241 agcccgctggttcacactggcgcatgcgtctccgttgagggcgtcctcaaagagccacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1538 agcccgctggttcacactggcgcatgcgtctccgttgagggcgtcctcaaagagccacct 1479
Query: 301 gaaggaaccaaacagaagattgagctccgagttgaaaaagtgctccatgttggacccgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1478 gaaggaaccaaacagaagattgagctccgagttgaaaaagtgctccatgttggacccgtt 1419
Query: 361 gacccggctaagtacccgattcctaagacgaagcttacgcttgagttcttgagggatcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1418 gacccggctaagtacccgattcctaagacgaagcttacgcttgagttcttgagggatcgt 1359
Query: 421 atccattttcgacccagaacaaacacgatttctgctgttgcccggattcgcaatgcactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1358 atccattttcgacccagaacaaacacgatttctgctgttgcccggattcgcaatgcactt 1299
Query: 481 gcttttgccacccactcattctttcaagagcatggttttctatatgttcatactccaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1298 gcttttgccacccactcattctttcaagagcatggttttctatatgttcatactccaatt 1239
Query: 541 atcacaactagtgactgtgagggtgccggtgaaatgtttcaagttaccaccttgataagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1238 atcacaactagtgactgtgagggtgccggtgaaatgtttcaagttaccaccttgataagt 1179
Query: 601 gaaattgaaaagatagagaaggagctgattcagaatcctcctccatcagaagctgaaatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1178 gaaattgaaaagatagagaaggagctgattcagaatcctcctccatcagaagctgaaatt 1119
Query: 661 gaagcagctaagcttgttgttaaggagagaggagaggctgtggctcaactgaaatctgct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 gaagcagctaagcttgttgttaaggagagaggagaggctgtggctcaactgaaatctgct 1059
Query: 721 aaagcaagtaaggaggagatagctgcttcagtggctgaactgacaacagcaaaggagaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 aaagcaagtaaggaggagatagctgcttcagtggctgaactgacaacagcaaaggagaat 999
Query: 781 gtctcaaggctggtggaaagatctaaacttaaacctggcat 821
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 gtctcaaggctggtggaaagatctaaacttaaacctggcat 958