Jatropha Genome Database

JcCA0237851.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0237851.10 - phase: 0 /pseudo/partial
         (305 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01488                                                            329   2e-90

>KJC_c01488 
          Length = 745

 Score =  329 bits (166), Expect = 2e-90
 Identities = 166/166 (100%)
 Strand = Plus / Minus

                                                                       
Query: 28  cctatttcaaccgctacacagagagttctagctaccctctacgagaaagatttagaattt 87
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cctatttcaaccgctacacagagagttctagctaccctctacgagaaagatttagaattt 686

                                                                       
Query: 88  gagtttgttcatatcgatcttgccacgggagagcacaagagggagcctttcatttcccta 147
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gagtttgttcatatcgatcttgccacgggagagcacaagagggagcctttcatttcccta 626

                                                         
Query: 148 aatccatttggtcaagtcccagctctagaacacggagatctcaagc 193
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatccatttggtcaagtcccagctctagaacacggagatctcaagc 580