Jatropha Genome Database
- JcCA0225801.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0225801.10 + phase: 0 /partial
(747 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02175 1003 0.0
KJC_c00063 178 1e-44
KJC_s18190 119 1e-26
KJC_s19698 56 1e-07
>KJC_c02175
Length = 700
Score = 1003 bits (506), Expect = 0.0
Identities = 506/506 (100%)
Strand = Plus / Plus
Query: 28 ggacgaccaaaaggtgtcactccaaagtttagcttggcgcctcttgtgccacgtctatca 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ggacgaccaaaaggtgtcactccaaagtttagcttggcgcctcttgtgccacgtctatca 243
Query: 88 gagctgcttggcattcaggttgtcaaggctgatgatagcattggcccagaagtagagaaa 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gagctgcttggcattcaggttgtcaaggctgatgatagcattggcccagaagtagagaaa 303
Query: 148 ttggtggcttcactacctgaaggtggcgttctgctccttgagaacgtaaggttttacaag 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ttggtggcttcactacctgaaggtggcgttctgctccttgagaacgtaaggttttacaag 363
Query: 208 gaagaagaaaagaatgatcctgaacatgctaagaaacttgcttctttagctgatctctat 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gaagaagaaaagaatgatcctgaacatgctaagaaacttgcttctttagctgatctctat 423
Query: 268 gtgaatgatgcatttgggactgcacacagagcacatgcttcaactgagggagtcacaaaa 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gtgaatgatgcatttgggactgcacacagagcacatgcttcaactgagggagtcacaaaa 483
Query: 328 ttcttaaagccatctgttgctggcttcctcttacagaaggagctggactaccttgttggg 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttcttaaagccatctgttgctggcttcctcttacagaaggagctggactaccttgttggg 543
Query: 388 gcagtttcaaacccaaagaggccattcgctgccattgtgggtggttcaaaggtctcatcc 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gcagtttcaaacccaaagaggccattcgctgccattgtgggtggttcaaaggtctcatcc 603
Query: 448 aagattggagttattgaatcactcctcgagaaggtcgatgtcctgcttttgggaggagga 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 aagattggagttattgaatcactcctcgagaaggtcgatgtcctgcttttgggaggagga 663
Query: 508 atgattttcactttttacaaggcaca 533
||||||||||||||||||||||||||
Sbjct: 664 atgattttcactttttacaaggcaca 689
>KJC_c00063
Length = 1602
Score = 178 bits (90), Expect = 1e-44
Identities = 321/398 (80%)
Strand = Plus / Plus
Query: 136 gaagtagagaaattggtggcttcactacctgaaggtggcgttctgctccttgagaacgta 195
||||| ||||||||||||||| | || ||||| || ||| ||||||||||||| |||
Sbjct: 403 gaagttgagaaattggtggctgagatcccagaagggggtgttttgctccttgagaatgta 462
Query: 196 aggttttacaaggaagaagaaaagaatgatcctgaacatgctaagaaacttgcttcttta 255
||||| ||||||| || || |||||||| |||||| ||||||||| || |||||| |
Sbjct: 463 aggttccacaaggaggaggagaagaatgaccctgaatttgctaagaagctagcttctctt 522
Query: 256 gctgatctctatgtgaatgatgcatttgggactgcacacagagcacatgcttcaactgag 315
|| ||| |||||||||||||||||||||| ||||| || ||||| |||||||| || |||
Sbjct: 523 gcagatgtctatgtgaatgatgcatttggcactgctcatagagcccatgcttccacagag 582
Query: 316 ggagtcacaaaattcttaaagccatctgttgctggcttcctcttacagaaggagctggac 375
|| || | |||| ||| || || ||||||||||| || || | |||||||| || ||
Sbjct: 583 ggggtagctaaatacttgaaaccttctgttgctggttttctgatgcagaaggaacttgat 642
Query: 376 taccttgttggggcagtttcaaacccaaagaggccattcgctgccattgtgggtggttca 435
|| |||||||| || || |||| || |||| |||||| ||||| ||||| ||||| |||
Sbjct: 643 tatcttgttggagctgtggcaaatcctaagaagccatttgctgcaattgttggtggctca 702
Query: 436 aaggtctcatccaagattggagttattgaatcactcctcgagaaggtcgatgtcctgctt 495
||||| ||| ||||||||||||| || || || ||| | |||||||| ||| |||| |
Sbjct: 703 aaggtttcaaccaagattggagtgatagagtccctcttggagaaggttgatatcctcatc 762
Query: 496 ttgggaggaggaatgattttcactttttacaaggcaca 533
||||| ||||||||||| || || || |||||||||||
Sbjct: 763 ttgggtggaggaatgatatttaccttctacaaggcaca 800
>KJC_s18190
Length = 488
Score = 119 bits (60), Expect = 1e-26
Identities = 228/284 (80%)
Strand = Plus / Plus
Query: 136 gaagtagagaaattggtggcttcactacctgaaggtggcgttctgctccttgagaacgta 195
||||| ||||||||||||||| | || ||||| || ||| ||||||||||||| |||
Sbjct: 132 gaagttgagaaattggtggctgagatcccagaagggggtgttttgctccttgagaatgta 191
Query: 196 aggttttacaaggaagaagaaaagaatgatcctgaacatgctaagaaacttgcttcttta 255
||||| ||||||| || || |||||||| |||||| ||||||||| || |||||| |
Sbjct: 192 aggttccacaaggaggaggagaagaatgaccctgaatttgctaagaagctagcttctctt 251
Query: 256 gctgatctctatgtgaatgatgcatttgggactgcacacagagcacatgcttcaactgag 315
|| ||| |||||||||||||||||||||| ||||| || ||||| |||||||| || |||
Sbjct: 252 gcagatgtctatgtgaatgatgcatttggcactgctcatagagcccatgcttccacagag 311
Query: 316 ggagtcacaaaattcttaaagccatctgttgctggcttcctcttacagaaggagctggac 375
|| || | |||| ||| || || ||||||||||| || || | |||||||| || ||
Sbjct: 312 ggggtagctaaatacttgaaaccttctgttgctggttttctgatgcagaaggaacttgat 371
Query: 376 taccttgttggggcagtttcaaacccaaagaggccattcgctgc 419
|| |||||||| || || |||| || |||| |||||| |||||
Sbjct: 372 tatcttgttggagctgtggcaaatcctaagaagccatttgctgc 415
>KJC_s19698
Length = 317
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 638 ctgatgttgtgattgcagacaagtttgctcctgatgcaaacagtaaggtttg 689
||||||| || ||||| |||||||||||| ||||||| ||||| ||||||||
Sbjct: 217 ctgatgtggttattgctgacaagtttgctgctgatgctaacagcaaggtttg 166