Jatropha Genome Database

JcCA0224821.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0224821.10 + phase: 0 
         (495 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02715                                                            829   0.0  

>KJC_c02715 
          Length = 736

 Score =  829 bits (418), Expect = 0.0
 Identities = 428/430 (99%), Gaps = 1/430 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctgatctaaatccactccttcccgtttcacaacctcaagatgccggctacacttct 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 16  atggctgatctaaatccactccttcccgtttgacaacctcaagatgccggctacacttct 75

                                                                       
Query: 61  ctcccggatggcattaacgccgagacatcttcggcagtccatcgtcggatttccaaaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76  ctcccggatggcattaacgccgagacatcttcggcagtccatcgtcggatttccaaaaaa 135

                                                                       
Query: 121 cttctctccgtcgttctttctgggttgttttttgttttattgtttgtggctttaattgat 180
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 136 cttctctccgtcgttctttctgggttgttttttgttt-attgtttgtggctttaattgat 194

                                                                       
Query: 181 aacaataatcgatccgagaaaaacattctttcccaagaaaacgaaaatgtaggttcttta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aacaataatcgatccgagaaaaacattctttcccaagaaaacgaaaatgtaggttcttta 254

                                                                       
Query: 241 ggtacgtcgcaagatacagccaaaccggagattttgaggcccgtctctcgcggcgtctcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ggtacgtcgcaagatacagccaaaccggagattttgaggcccgtctctcgcggcgtctcc 314

                                                                       
Query: 301 gccggagtttctcaaaaggctaacctgatatctagtcactcagaatcgccagactatcca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gccggagtttctcaaaaggctaacctgatatctagtcactcagaatcgccagactatcca 374

                                                                       
Query: 361 tggaacaatagcatgttatcatggcaaagaactgctttccatttccaacctgagaagaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tggaacaatagcatgttatcatggcaaagaactgctttccatttccaacctgagaagaat 434

                     
Query: 421 tggatgaatg 430
           ||||||||||
Sbjct: 435 tggatgaatg 444