Jatropha Genome Database

JcCA0224291.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0224291.10 + phase: 0 /partial
         (215 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03863                                                            349   2e-96

>KJC_c03863 
          Length = 841

 Score =  349 bits (176), Expect = 2e-96
 Identities = 176/176 (100%)
 Strand = Plus / Minus

                                                                       
Query: 40  caggttattgcacacgaagacattgcccaaaacctcaagaagctggtcactgaacaagac 99
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 caggttattgcacacgaagacattgcccaaaacctcaagaagctggtcactgaacaagac 782

                                                                       
Query: 100 tgtccacatttgcttttctatggcccctctggttctggcaagaaaacactaatcatggcc 159
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgtccacatttgcttttctatggcccctctggttctggcaagaaaacactaatcatggcc 722

                                                                   
Query: 160 ctccttcgtcagattttcggtgctagcgctgaaaaggtgaaggtagaaaataggac 215
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctccttcgtcagattttcggtgctagcgctgaaaaggtgaaggtagaaaataggac 666