Jatropha Genome Database
- JcCA0220511.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0220511.20 + phase: 1 /partial
(458 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00135 365 e-101
KJC_c00071 220 2e-57
KJC_c09164 64 3e-10
>KJC_c00135
Length = 1268
Score = 365 bits (184), Expect = e-101
Identities = 367/428 (85%)
Strand = Plus / Plus
Query: 9 aagactgttgatggaccatcaatgaaggattggagaggtggtagagctgcttccttcaat 68
|||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 622 aagactgttgatgggccatcaatgaaggactggagaggtggaagagctgcctccttcaac 681
Query: 69 atcattcctagcagtactggagctgccaaggctgtagggaaagtgctgcctgcattgaat 128
|||||||||||||| ||||||||||| |||||||| || || || || |||||| | |||
Sbjct: 682 atcattcctagcagcactggagctgctaaggctgttggaaaggttcttcctgcacttaat 741
Query: 129 ggaaaattgacaggaatggctttccgtgttcccactgttgatgtctcagtggttgacctt 188
|| |||||||| |||||| | ||||||||||| ||||| ||||| || || |||||||||
Sbjct: 742 ggcaaattgactggaatgtcattccgtgttccaactgtggatgtttctgttgttgacctt 801
Query: 189 actgtgaggcttgagaagaaggccacttatgaggagatcaaagcagccatcaaggcagaa 248
||||| |||||||| |||||||| || |||||||| |||||||| || ||||||| ||
Sbjct: 802 actgtcaggcttgaaaagaaggcaacatatgaggacatcaaagctgcaatcaaggaggag 861
Query: 249 tctgagggaagtatgaaaggaatcctcggttacactgaagatgatgttgtctcaactgat 308
|||||||| | | || |||||| | || || |||||||||||||| || || ||||
Sbjct: 862 tctgagggcaagcttaagggaatcttgggctatactgaagatgatgtagtgtcttctgac 921
Query: 309 tttgtgggtgacaacaggtctagcatctttgatgccaaggctggaattgcattgaatgat 368
|||||||| || | ||| || || || |||||||||||||| |||||||| ||||||||
Sbjct: 922 tttgtgggcgatagcagatcaagtatttttgatgccaaggcaggaattgctttgaatgac 981
Query: 369 aactttgtgaaacttgtctcttggtatgacaatgaatggggctacagttcacgtgtgatc 428
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 982 aactttgtgaaacttgtctcttggtatgacaacgaatggggctacagttcacgtgtgcta 1041
Query: 429 gacttgat 436
||||||||
Sbjct: 1042 gacttgat 1049
>KJC_c00071
Length = 1672
Score = 220 bits (111), Expect = 2e-57
Identities = 330/403 (81%)
Strand = Plus / Minus
Query: 1 ctacacaaaagactgttgatggaccatcaatgaaggattggagaggtggtagagctgctt 60
|||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||
Sbjct: 764 ctacccaaaagactgttgatgggccatcaagcaaggattggagaggtggaagagctgctt 705
Query: 61 ccttcaatatcattcctagcagtactggagctgccaaggctgtagggaaagtgctgcctg 120
||||||| |||||||||||||| || |||||||| |||||||| ||||| ||||| ||||
Sbjct: 704 ccttcaacatcattcctagcagcacaggagctgctaaggctgttgggaaggtgctacctg 645
Query: 121 cattgaatggaaaattgacaggaatggctttccgtgttcccactgttgatgtctcagtgg 180
| |||| || || | || |||||||||||||||||||| |||||||||||||| ||||
Sbjct: 644 ctctgaacggcaagcttactggaatggctttccgtgttccaactgttgatgtctctgtgg 585
Query: 181 ttgaccttactgtgaggcttgagaagaaggccacttatgaggagatcaaagcagccatca 240
|||| || ||||| ||||| |||||| || || ||||| | || ||||| || ||||
Sbjct: 584 ttgatctcactgttaggctagagaaggctgctacatatgaacaaattaaagctgctatca 525
Query: 241 aggcagaatctgagggaagtatgaaaggaatcctcggttacactgaagatgatgttgtct 300
| | || |||||||||| |||| ||||| | || || || || ||| | || |
Sbjct: 524 aagaggagtctgagggaaagctgaagggaatattgggctatgtcgaggaagatctggttt 465
Query: 301 caactgattttgtgggtgacaacaggtctagcatctttgatgccaaggctggaattgcat 360
| |||| || | |||||||||||||| || || ||||||||||| ||||||||||| |
Sbjct: 464 cctctgacttcattggtgacaacaggtcaagtatttttgatgccaaagctggaattgctt 405
Query: 361 tgaatgataactttgtgaaacttgtctcttggtatgacaatga 403
|||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 404 tgaatgataagtttgtgaagcttgtttcttggtacgacaatga 362
>KJC_c09164
Length = 474
Score = 63.9 bits (32), Expect = 3e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 3 acacaaaagactgttgatggaccatcaatgaaggattggagaggtggt 50
|||||||||||||| ||||| |||||||||||||||||| | ||||||
Sbjct: 371 acacaaaagactgtagatggtccatcaatgaaggattggcgtggtggt 418