Jatropha Genome Database
- JcCA0219411.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0219411.10 - phase: 0 /partial
(537 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00779 1057 0.0
KJC_s15809 392 e-109
>KJC_c00779
Length = 1289
Score = 1057 bits (533), Expect = 0.0
Identities = 536/537 (99%)
Strand = Plus / Plus
Query: 1 cttcatgagagcatatatcagagcgtacttgatcagctagttaatgtatacaatcaagtc 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cttcatgagagtatatatcagagcgtacttgatcagctagttaatgtatacaatcaagtc 739
Query: 61 aaagttggggacccattggaaaaaggtacattgcttgggccattgcacacttcagaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aaagttggggacccattggaaaaaggtacattgcttgggccattgcacacttcagaatca 799
Query: 121 aggaaaaattttgagaagggaatcgagaagataaagtccgagggaggaaagattctaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aggaaaaattttgagaagggaatcgagaagataaagtccgagggaggaaagattctaact 859
Query: 181 ggtggttcaattataaaatctgaagggaattttgtgcagcccacaatagttgagatttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 ggtggttcaattataaaatctgaagggaattttgtgcagcccacaatagttgagatttct 919
Query: 241 ccaaacacagatgttgtaaaggaagagttatttgctcctgtgctttatgttatgaaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 ccaaacacagatgttgtaaaggaagagttatttgctcctgtgctttatgttatgaaattt 979
Query: 301 cagactttgcaagaagccattgaaataaataattcggtgcctcaaggattaagtagttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 cagactttgcaagaagccattgaaataaataattcggtgcctcaaggattaagtagttct 1039
Query: 361 atcttcacccgcaaacccgaaattatcttcaagtggattgggccacaaggaagtgactgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 atcttcacccgcaaacccgaaattatcttcaagtggattgggccacaaggaagtgactgt 1099
Query: 421 ggtattgttaatgtcaatatacctacaaatggtgctgaaataggtggtgcatttggcggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 ggtattgttaatgtcaatatacctacaaatggtgctgaaataggtggtgcatttggcggt 1159
Query: 481 gaaaaggctacaggcggtggtcgtgaagcaggaagtgattcttggaagcagtatatg 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1160 gaaaaggctacaggcggtggtcgtgaagcaggaagtgattcttggaagcagtatatg 1216
>KJC_s15809
Length = 486
Score = 392 bits (198), Expect = e-109
Identities = 201/202 (99%)
Strand = Plus / Minus
Query: 1 cttcatgagagcatatatcagagcgtacttgatcagctagttaatgtatacaatcaagtc 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cttcatgagagtatatatcagagcgtacttgatcagctagttaatgtatacaatcaagtc 143
Query: 61 aaagttggggacccattggaaaaaggtacattgcttgggccattgcacacttcagaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 aaagttggggacccattggaaaaaggtacattgcttgggccattgcacacttcagaatca 83
Query: 121 aggaaaaattttgagaagggaatcgagaagataaagtccgagggaggaaagattctaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 aggaaaaattttgagaagggaatcgagaagataaagtccgagggaggaaagattctaact 23
Query: 181 ggtggttcaattataaaatctg 202
||||||||||||||||||||||
Sbjct: 22 ggtggttcaattataaaatctg 1