Jatropha Genome Database

JcCA0216321.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0216321.10 - phase: 0 
         (402 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05967                                                            690   0.0  

>KJC_c05967 
          Length = 565

 Score =  690 bits (348), Expect = 0.0
 Identities = 348/348 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggctgagaacccaacaagtccagcaggagggagccatgagagcggtggtgagcagagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 atggctgagaacccaacaagtccagcaggagggagccatgagagcggtggtgagcagagc 436

                                                                       
Query: 61  ccgcactctggagtgagggaacaggataggtacctgcctattgccaacataagcaggatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ccgcactctggagtgagggaacaggataggtacctgcctattgccaacataagcaggatc 376

                                                                       
Query: 121 atgaagaaggctttgcctgccaatggaaaaattgctaaagatgctaaggatactgtgcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 atgaagaaggctttgcctgccaatggaaaaattgctaaagatgctaaggatactgtgcag 316

                                                                       
Query: 181 gaatgtgtctctgaatttattagctttattaccagcgaggcgagtgataagtgtcagaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gaatgtgtctctgaatttattagctttattaccagcgaggcgagtgataagtgtcagaag 256

                                                                       
Query: 241 gagaaaagaaagacaatcaatggagatgatttgttgtgggcgatggcaactctaggcttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gagaaaagaaagacaatcaatggagatgatttgttgtgggcgatggcaactctaggcttt 196

                                                           
Query: 301 gaggactatattgaaccacttaaggtgtaccttgctaggtacagggag 348
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gaggactatattgaaccacttaaggtgtaccttgctaggtacagggag 148