Jatropha Genome Database
- JcCA0206791.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0206791.10 + phase: 0 /partial
(819 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00269 1610 0.0
KJC_s16264 68 4e-11
>KJC_c00269
Length = 2004
Score = 1610 bits (812), Expect = 0.0
Identities = 819/820 (99%), Gaps = 1/820 (0%)
Strand = Plus / Plus
Query: 1 gcaagaaatgttattggagatagagggctggaagttcttgcttccagttgtaagcgacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 gcaagaaatgttattggagatagagggctggaagttcttgcttccagttgtaagcgacta 1181
Query: 61 aagagacttagaattgagcgtggtgctgatgagcagggaatggaggatgaagaaggtgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 aagagacttagaattgagcgtggtgctgatgagcagggaatggaggatgaagaaggtgta 1241
Query: 121 gtttcgcagagaggattgattgctttggctcagggctgtctggaacttgagtacatggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 gtttcgcagagaggattgattgctttggctcagggctgtctggaacttgagtacatggct 1301
Query: 181 gtttatgtttctgatatcacaaatgcagcactagaacatattggtgcttgcttaaagaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 gtttatgtttctgatatcacaaatgcagcactagaacatattggtgcttgcttaaagaac 1361
Query: 241 ctgaatgatttccgcctggtcttgctcgaccgagaagagaggataactgatctaccactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 ctgaatgatttccgcctggtcttgctcgaccgagaagagaggataactgatctaccactt 1421
Query: 301 gacaatggtgttcgagctctattgagacattgtgagaagctccggaggtttgctctgtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 gacaatggtgttcgagctctattgagacattgtgagaagctccggaggtttgctctgtat 1481
Query: 361 cttcgacaaggaggattgactgatgtgggtcttggttatattgggcagtacagtcagaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1482 cttcgacaaggaggattgactgatgtgggtcttggttatattgggcagtacagtcagaat 1541
Query: 421 gtgagatggatgcttttgggttacgttggagagtctgatgaggggcttttagcattttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1542 gtgagatggatgcttttgggttacgttggagagtctgatgaggggcttttagcattttct 1601
Query: 481 aaaggatgtcctagtcttcaaaagctagaaatga-ggggctgttgtttcactgagagtgc 539
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1602 aaaggatgtcctagtcttcaaaagctagaaatgagggggctgttgtttcactgagagtgc 1661
Query: 540 attggctagagctgtgatgcaactgacctctttgaggtatctgtgggtgcaaggttataa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1662 attggctagagctgtgatgcaactgacctctttgaggtatctgtgggtgcaaggttataa 1721
Query: 600 agcatcgtcaattccaggtcgtgatcttttaacaatggctcgcccattttggaacattga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1722 agcatcgtcaattccaggtcgtgatcttttaacaatggctcgcccattttggaacattga 1781
Query: 660 gttaattcctcttagaaaagttgccatggttaatcaggttggcgaagatgcggtggttga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1782 gttaattcctcttagaaaagttgccatggttaatcaggttggcgaagatgcggtggttga 1841
Query: 720 gcaaccagcccatatacttgcatattactcccttgctggaccaagaacagattttccaga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1842 gcaaccagcccatatacttgcatattactcccttgctggaccaagaacagattttccaga 1901
Query: 780 gtgtgttttgcccttggatccgatgaggttggtttctgcg 819
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1902 gtgtgttttgcccttggatccgatgaggttggtttctgcg 1941
>KJC_s16264
Length = 351
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 gcaagaaatgttattggagatagagggctggaag 34
||||||||||||||||||||||||||||||||||
Sbjct: 318 gcaagaaatgttattggagatagagggctggaag 351