Jatropha Genome Database
- JcCA0200941.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0200941.10 + phase: 0 /partial
(407 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08227 807 0.0
KJC_c00527 333 2e-91
KJC_c00897 291 7e-79
>KJC_c08227
Length = 830
Score = 807 bits (407), Expect = 0.0
Identities = 407/407 (100%)
Strand = Plus / Minus
Query: 1 atggagaccttcctattcacttcggaatcggtgaacgagggacaccccgacaagctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atggagaccttcctattcacttcggaatcggtgaacgagggacaccccgacaagctctgc 742
Query: 61 gaccagatctccgatgcagtgctcgatgcttgtttggctcaggaccccgacagcaaggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaccagatctccgatgcagtgctcgatgcttgtttggctcaggaccccgacagcaaggtg 682
Query: 121 gcttgcgaaacttgcaccaagaccaacctggtcatggtttttggagagatcaccactaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcttgcgaaacttgcaccaagaccaacctggtcatggtttttggagagatcaccactaaa 622
Query: 181 gccaatatagactacgagaagattgtgcgcgacacttgccgttctattggattcacttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gccaatatagactacgagaagattgtgcgcgacacttgccgttctattggattcacttcc 562
Query: 241 gatgatgtgggtctcgatgctgaccattgtaaggtgcttgtcaatattgagcaacagagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatgatgtgggtctcgatgctgaccattgtaaggtgcttgtcaatattgagcaacagagt 502
Query: 301 cctgatattgctcaaggtgtccatggccatctcactaagcgccctgaggaaattggtgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgatattgctcaaggtgtccatggccatctcactaagcgccctgaggaaattggtgct 442
Query: 361 ggtgaccaaggtcacatgtttggctatgctactgatgagacccctga 407
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtgaccaaggtcacatgtttggctatgctactgatgagacccctga 395
>KJC_c00527
Length = 1425
Score = 333 bits (168), Expect = 2e-91
Identities = 345/404 (85%)
Strand = Plus / Minus
Query: 1 atggagaccttcctattcacttcggaatcggtgaacgagggacaccccgacaagctctgc 60
||||||||||||||||||||||| ||||| || |||||||| || ||||||||||| |||
Sbjct: 1326 atggagaccttcctattcacttccgaatctgttaacgagggccatcccgacaagctttgc 1267
Query: 61 gaccagatctccgatgcagtgctcgatgcttgtttggctcaggaccccgacagcaaggtg 120
|| ||| | || ||||| | ||||||||||| | | || || || |||||||||||
Sbjct: 1266 gatcaggtttcagatgccatcctcgatgcttgccttgagcaagatcctgacagcaaggtt 1207
Query: 121 gcttgcgaaacttgcaccaagaccaacctggtcatggtttttggagagatcaccactaaa 180
|||||||| |||||||||||||||||| |||||||||| ||||| |||||||| || |||
Sbjct: 1206 gcttgcgagacttgcaccaagaccaacatggtcatggtctttggtgagatcacaaccaaa 1147
Query: 181 gccaatatagactacgagaagattgtgcgcgacacttgccgttctattggattcacttcc 240
|||||| ||||||| || |||||||| || ||||| |||||||| |||||||| |||
Sbjct: 1146 gccaatgtagactatgaaaagattgttcgtgacacctgccgttcaattggatttgtttct 1087
Query: 241 gatgatgtgggtctcgatgctgaccattgtaaggtgcttgtcaatattgagcaacagagt 300
|||||||| ||||| ||||||||| | || ||||| || || | |||||||| |||||
Sbjct: 1086 gatgatgttggtcttgatgctgacaaatgcaaggtcctagtttacattgagcagcagagc 1027
Query: 301 cctgatattgctcaaggtgtccatggccatctcactaagcgccctgaggaaattggtgct 360
|||||||||||||| ||||||||||||||||| || ||||| |||||||| |||||||||
Sbjct: 1026 cctgatattgctcagggtgtccatggccatcttaccaagcggcctgaggagattggtgct 967
Query: 361 ggtgaccaaggtcacatgtttggctatgctactgatgagacccc 404
||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 966 ggtgaccaaggtcacatgtttggttatgccactgatgaaacccc 923
>KJC_c00897
Length = 1428
Score = 291 bits (147), Expect = 7e-79
Identities = 342/407 (84%)
Strand = Plus / Minus
Query: 1 atggagaccttcctattcacttcggaatcggtgaacgagggacaccccgacaagctctgc 60
||||||||||| |||||||| || || || ||||||||||||||||||||||| |||||
Sbjct: 1361 atggagacctttctattcacctctgagtccgtgaacgagggacaccccgacaaactctgt 1302
Query: 61 gaccagatctccgatgcagtgctcgatgcttgtttggctcaggaccccgacagcaaggtg 120
||||||||||| ||||| || | ||||| || | | || || || |||||||||||
Sbjct: 1301 gaccagatctctgatgcggtattagatgcctgccttgagcaagatcctgacagcaaggtt 1242
Query: 121 gcttgcgaaacttgcaccaagaccaacctggtcatggtttttggagagatcaccactaaa 180
|| || ||||| ||||||||||||||| |||||||||| ||||||||||| ||||| |||
Sbjct: 1241 gcctgtgaaacatgcaccaagaccaacatggtcatggtctttggagagattaccaccaaa 1182
Query: 181 gccaatatagactacgagaagattgtgcgcgacacttgccgttctattggattcacttcc 240
||||| ||||||| |||||||| || || | || |||||| |||||||| | ||||
Sbjct: 1181 gccaaggtagactatgagaagatagttcgtcagacatgccgtggaattggatttatttcc 1122
Query: 241 gatgatgtgggtctcgatgctgaccattgtaaggtgcttgtcaatattgagcaacagagt 300
|||||||| ||||| ||||||||| | || ||||| ||||| || ||||||||||||||
Sbjct: 1121 gatgatgttggtcttgatgctgacaaatgcaaggtccttgttaacattgagcaacagagc 1062
Query: 301 cctgatattgctcaaggtgtccatggccatctcactaagcgccctgaggaaattggtgct 360
|||||||||||||| |||||||||||||| |||| |||||||| || || |||||||||
Sbjct: 1061 cctgatattgctcagggtgtccatggccacttcaccaagcgcccagaagagattggtgct 1002
Query: 361 ggtgaccaaggtcacatgtttggctatgctactgatgagacccctga 407
||||| || || || |||||||| ||||| |||||||||||||||||
Sbjct: 1001 ggtgatcagggacatatgtttggttatgccactgatgagacccctga 955