Jatropha Genome Database

JcCA0192231.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0192231.10 + phase: 0 /partial/short
         (135 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c06112                                                            208   2e-54

>KJC_c06112 
          Length = 791

 Score =  208 bits (105), Expect = 2e-54
 Identities = 105/105 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtcatgcagaatcaagaggcagttgatttggtgaaacctattaaggatccgcaggctgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gtcatgcagaatcaagaggcagttgatttggtgaaacctattaaggatccgcaggctgct 746

                                                        
Query: 61  gctaggcggttaacgactgaagcattgacaagaaagagtaaggat 105
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gctaggcggttaacgactgaagcattgacaagaaagagtaaggat 791