Jatropha Genome Database
- JcCA0163731.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0163731.10 + phase: 2 /partial
(1015 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06912 547 e-155
KJC_c02434 220 5e-57
>KJC_c06912
Length = 550
Score = 547 bits (276), Expect = e-155
Identities = 276/276 (100%)
Strand = Plus / Plus
Query: 740 cctgagaaattcaatccggagagatttattgatagttcaatcgattatttgggtaatcat 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 cctgagaaattcaatccggagagatttattgatagttcaatcgattatttgggtaatcat 269
Query: 800 tttgaatatcttccatttggtgcaggaaaaagagtatgccctggaattgcgttaggtatg 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tttgaatatcttccatttggtgcaggaaaaagagtatgccctggaattgcgttaggtatg 329
Query: 860 gttcatatggaaaatttccttgcaaatttgctctttcattttgactggaaatttcctaaa 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gttcatatggaaaatttccttgcaaatttgctctttcattttgactggaaatttcctaaa 389
Query: 920 ggaataactgcagagaatcttgacatgaccgatgcttttggaggagttatgaagagaaaa 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ggaataactgcagagaatcttgacatgaccgatgcttttggaggagttatgaagagaaaa 449
Query: 980 gttgaccttgaactgattcccattccataccatcct 1015
||||||||||||||||||||||||||||||||||||
Sbjct: 450 gttgaccttgaactgattcccattccataccatcct 485
>KJC_c02434
Length = 1108
Score = 220 bits (111), Expect = 5e-57
Identities = 320/387 (82%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 47 gtaatgggtattcaactcggtgaaattccctttcttgttgtttcctcgctggaagcagcc 106
||||||||| ||||||| || || |||| || ||||| || ||||||| |||| ||||
Sbjct: 1058 gtaatgggtgttcaacttgggcaagttcctttccttgtcgtgtcctcgccggaaacagct 999
Query: 107 aaagaagtactgaaaatccaagatcccatttttgcagaacgagcgcttatccttgcaaat 166
||||||||| ||||||| ||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 998 aaagaagtaatgaaaatacaagatcccgtttttgcagaacgaccgcttgtccttgcagga 939
Query: 167 gatgtggtgaattataaccgtaacgggatgggttttgcgtcatacggatatcaatggagg 226
|| | ||| ||||||||| || | || | ||||| ||| |||||| |||| ||||||
Sbjct: 938 gaaatagtgctttataaccgaaatgacatcgtttttgggtcgtacggagatcagtggagg 879
Query: 227 caattgagaaaattttgcacgttggcattacttagcgcaaaacgagtacagtcgtttcaa 286
||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||| | |
Sbjct: 878 caaatgagaaaattttgcacgttggaattacttagcacaaaacgagtacagtcgttccga 819
Query: 287 tcaataagagaagaagaaatggcagattttat-aaaacttctacgttccaaagaaggaag 345
| | |||||||||||| | ||| |||| | ||||||| | ||| | || ||||||
Sbjct: 818 cccgtgagagaagaagaagttgcatcttttgtaaaaacttatgcgtacaaagaaaggaac 759
Query: 346 ttctgttaatcttactcatactttatttacggttacaaattctataattgcaagaaatgc 405
| ||||||||||||||||| ||||| || | | |||||||||||| |||||||||||||
Sbjct: 758 tcctgttaatcttactcatgcttta-ttgctttaacaaattctatagttgcaagaaatgc 700
Query: 406 tattggtcataaaagcaaaaatcaaga 432
| ||||||||||||||||||| |||||
Sbjct: 699 tgttggtcataaaagcaaaaaccaaga 673
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 741 ctgagaaattcaatccggagagatttattgatag 774
|||||| |||||| ||||||||||||||||||||
Sbjct: 36 ctgagagattcaagccggagagatttattgatag 3