Jatropha Genome Database

JcCA0155031.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0155031.30 - phase: 0 
         (1566 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c11075                                                             54   1e-06

>KJC_c11075 
          Length = 730

 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                       
Query: 244 aagcttaacccacaagatgcttggctacctatcactgagtctcgcaatggaaatgctcat 303
           |||||| ||||  ||||||||||||| || || || || ||||| |||||||||||  | 
Sbjct: 133 aagcttgaccctgaagatgcttggcttccaattacagaatctcgaaatggaaatgcatac 192

                          
Query: 304 tacgctgcgtttcat 318
           |||||||||||||||
Sbjct: 193 tacgctgcgtttcat 207